Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637144
Identifier: 121637144
GI number: 121637144
Start: 1387479
End: 1389164
Strand: Reverse
Name: 121637144
Synonym: BCG_1275c
Alternate gene names: NA
Gene position: 1389164-1387479 (Counterclockwise)
Preceding gene: 121637145
Following gene: 121637143
Centisome position: 31.76
GC content: 68.39
Gene sequence:
>1686_bases GTGGCCAGAAACCCGTCACCTGCCTTGGACCGGCCGTGGCGACGTCCCGGTGCTCTCCGGTATGCGCTGGAGCGGGTTCG CGGCGTCGCCAAGCCGCCGATCACCGTCACCGATCCGCCGGCCGACGTCGTCATAGAACGCGACGTCGAGGTGCCTACCC GCGACGGAACGCTGCTGCGGATCAACGTCTTTCGTAGCGCCGAAGGTGGGGCTAGGCCGGTGATCGCGAGCATCCATCCC TACGGCAAGGACGCCCTGCCGCGGCGGCGGGGCAACCGGTGGACGTTCTCACCACAATACCGGATGCTGCGCCAGCCGAA GCCGCTGACCTTCTCGGCGCTGACCGGCTGGGAGGCGCCGGACCCGGCGTGGTGGACCGCGCAGGGCTTCGTCGTGGTCA ATGCGGATTCGCGCGGCTGCGGCCGCTCCGACGGTACCGGAGACCTGCTGTCACACCAGGAAGCCGAGGACACCTACGAC CTGGTGGGATGGCTCGCCGACCAGTCATGGAGTGATGGGCGCGTCGTCATGCTGGGGGTGTCTTATCTGGCCATTAGCCA GTACGCCGTGGCCGCGCTGCAACCGCCGGCGCTGCGGGCGATCTGCCCGTGGGAGGGTTTCACCGACGCCTACCGCGACT TGGCCTTTCCCGGCGGCATCCGGGAGTCAGGGTTCACCCGGCTGTGGTCGCGCGGGGTGCGACGTCGCACACGTCAGACC TACGACATGGAGCAGATGCAAGAGGCTCACCCGCTGCGCGACGATTTCTGGCGCTCGCGAGTACCCGACCTGTCGGCGAT CAAGGTTCCGATGCTGGTCTGCGGTAGCTTCTCGGACAACAACTTGCACAGCCGCGGGTCGATCCGCGCTTTTACCCGCA GCGGCTGCGGTCACGCCCGGCTGTATACCCATCGCGGGGGCAAATGGGAGACCTTCTACTCAGCGACCGCGCTGTCCGAG CAGCTGAAGTTCTTGCGAGACGCGCTGGCCGGCTCCTCCGGTTCGCGCAGCGTTCGCCTCGAGGTGCGTGAGGATCGCGA CACCATCACCGCGGTGCGTGAAGAGACCCAGTGGCCGCTTGCCGGCACGCGTTGGCGGCCAATGTATCTCGCCGGGCCGG GGCTGCTGGCAACCGAGCCGCCGCCGACGGCGGGCAGCATCAGGTTCCAAACTCGCTCTCGGGCAGCAGCATTCAATTGG ACGATCCCCGAAGACATCGAGTTGACCGGCCCGATGGCCGCCCGCCTGTGGGTTCAATTGGATGGCTGCGACGACGCGAA CCTGTTCGTCGGAGTGGAGAAGTGGCGCGATGGCCAGTTCGTTGCGTTTGAGGGGTCCTACGGCTGGGGCCGTGACCGGG TGACCACCGGCTGGCAGCGGGTCTCGCTGCGCGAGCTCGACCCCGAGCTCTCGCAGCCATGGGAGCCGGTCCCGGCGTGT GCTCGGCCCCGGCCGGTCACCGCCGGCGAGGTCGTCGCCGTCGATGTCGCGCTTGGCCCGTCGGCGACATTGTTCCGCGC CGGCGAACAGTTACGACTGGTGGTTGGCGGACGCTGGTTGTCCCCCCGCAACCCGCTCACCGGCCAATTCCCGGCCGCCT ACCCACGCCCGCCGCGTGGTCGTGTCACGCTGCACTGGGGCCCACGCTACGACGCGCACCTGCTGATACCGGAGGTCCCT GGGTAG
Upstream 100 bases:
>100_bases GACGCAAGAACTCAGCGGGTACCGCGAATACCGGCAACTGGTGCGCTACCGGTTGGTGCCCTACGTGTGGTAGCGGTCGA ATAGCTTTAGGGTAACGGGC
Downstream 100 bases:
>100_bases CCCGGGTTGCCGAGCGCTGGCTGACGGCGCGCGTCACACGCGCGGCGTCGGTGACGAGTCCGTCGAAAACACCGCATGCC GTAACGAGCCCACGATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVEVPTRDGTLLRINVFRSAEGGARPVIASIHP YGKDALPRRRGNRWTFSPQYRMLRQPKPLTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSDGTGDLLSHQEAEDTYD LVGWLADQSWSDGRVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQT YDMEQMQEAHPLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHARLYTHRGGKWETFYSATALSE QLKFLRDALAGSSGSRSVRLEVREDRDTITAVREETQWPLAGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNW TIPEDIELTGPMAARLWVQLDGCDDANLFVGVEKWRDGQFVAFEGSYGWGRDRVTTGWQRVSLRELDPELSQPWEPVPAC ARPRPVTAGEVVAVDVALGPSATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRGRVTLHWGPRYDAHLLIPEVP G
Sequences:
>Translated_561_residues MARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVEVPTRDGTLLRINVFRSAEGGARPVIASIHP YGKDALPRRRGNRWTFSPQYRMLRQPKPLTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSDGTGDLLSHQEAEDTYD LVGWLADQSWSDGRVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQT YDMEQMQEAHPLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHARLYTHRGGKWETFYSATALSE QLKFLRDALAGSSGSRSVRLEVREDRDTITAVREETQWPLAGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNW TIPEDIELTGPMAARLWVQLDGCDDANLFVGVEKWRDGQFVAFEGSYGWGRDRVTTGWQRVSLRELDPELSQPWEPVPAC ARPRPVTAGEVVAVDVALGPSATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRGRVTLHWGPRYDAHLLIPEVP G >Mature_560_residues ARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVEVPTRDGTLLRINVFRSAEGGARPVIASIHPY GKDALPRRRGNRWTFSPQYRMLRQPKPLTFSALTGWEAPDPAWWTAQGFVVVNADSRGCGRSDGTGDLLSHQEAEDTYDL VGWLADQSWSDGRVVMLGVSYLAISQYAVAALQPPALRAICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQTY DMEQMQEAHPLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHARLYTHRGGKWETFYSATALSEQ LKFLRDALAGSSGSRSVRLEVREDRDTITAVREETQWPLAGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNWT IPEDIELTGPMAARLWVQLDGCDDANLFVGVEKWRDGQFVAFEGSYGWGRDRVTTGWQRVSLRELDPELSQPWEPVPACA RPRPVTAGEVVAVDVALGPSATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRGRVTLHWGPRYDAHLLIPEVPG
Specific function: Unknown
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 62628; Mature: 62496
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVEVPTRDGTLLR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCCEEE INVFRSAEGGARPVIASIHPYGKDALPRRRGNRWTFSPQYRMLRQPKPLTFSALTGWEAP EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEECCCCCC DPAWWTAQGFVVVNADSRGCGRSDGTGDLLSHQEAEDTYDLVGWLADQSWSDGRVVMLGV CCCEEEECCEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEH SYLAISQYAVAALQPPALRAICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQT HHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH YDMEQMQEAHPLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHAR CCHHHHHHHCCCHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEE LYTHRGGKWETFYSATALSEQLKFLRDALAGSSGSRSVRLEVREDRDTITAVREETQWPL EEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC AGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNWTIPEDIELTGPMAARLWVQL CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEECCCEEEEEEEEE DGCDDANLFVGVEKWRDGQFVAFEGSYGWGRDRVTTGWQRVSLRELDPELSQPWEPVPAC ECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHEEEHHHCCCHHCCCCCCCCCC ARPRPVTAGEVVAVDVALGPSATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRG CCCCCCCCCCEEEEEEECCCCHHEECCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCC RVTLHWGPRYDAHLLIPEVPG EEEEEECCCCCCEEEECCCCC >Mature Secondary Structure ARNPSPALDRPWRRPGALRYALERVRGVAKPPITVTDPPADVVIERDVEVPTRDGTLLR CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCCEEE INVFRSAEGGARPVIASIHPYGKDALPRRRGNRWTFSPQYRMLRQPKPLTFSALTGWEAP EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEECCCCCC DPAWWTAQGFVVVNADSRGCGRSDGTGDLLSHQEAEDTYDLVGWLADQSWSDGRVVMLGV CCCEEEECCEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEH SYLAISQYAVAALQPPALRAICPWEGFTDAYRDLAFPGGIRESGFTRLWSRGVRRRTRQT HHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH YDMEQMQEAHPLRDDFWRSRVPDLSAIKVPMLVCGSFSDNNLHSRGSIRAFTRSGCGHAR CCHHHHHHHCCCHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEE LYTHRGGKWETFYSATALSEQLKFLRDALAGSSGSRSVRLEVREDRDTITAVREETQWPL EEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC AGTRWRPMYLAGPGLLATEPPPTAGSIRFQTRSRAAAFNWTIPEDIELTGPMAARLWVQL CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEECCCEEEEEEEEE DGCDDANLFVGVEKWRDGQFVAFEGSYGWGRDRVTTGWQRVSLRELDPELSQPWEPVPAC ECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHEEEHHHCCCHHCCCCCCCCCC ARPRPVTAGEVVAVDVALGPSATLFRAGEQLRLVVGGRWLSPRNPLTGQFPAAYPRPPRG CCCCCCCCCCEEEEEEECCCCHHEECCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCC RVTLHWGPRYDAHLLIPEVPG EEEEEECCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]