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The map label for this gene is padR [H]

Identifier: 121637108

GI number: 121637108

Start: 1339506

End: 1340075

Strand: Reverse

Name: padR [H]

Synonym: BCG_1239c

Alternate gene names: 121637108

Gene position: 1340075-1339506 (Counterclockwise)

Preceding gene: 121637111

Following gene: 121637107

Centisome position: 30.63

GC content: 64.39

Gene sequence:

>570_bases
ATGGCGCTACCCCACGCGATCTTGGTGTCGCTGTGTGAACAGGCCAGCTCGGGCTACGAGTTGGCCCGCCGATTCGATCG
CTCCATCGGCTATTTCTGGACCGCAACCCATCAGCAGATCTATCGGACGTTACGGGTGATGGAGAACAACAACTGGGTGC
GCGCGACGACCGTGCTCCAGCATGGCCGGCCCGACAAGAAGGTATACGCGATCTCCGACAGCGGCCGGGCCGAGCTGGCT
CGCTGGATCGCCGAGCCGCTCAGCCCGACCAGGCCCGGCCGCGGCAGTGCGCTGACCGACAGCAGCACGCGCGATATCGC
CGTCAAGCTGCGTGGCGCCGGCTACGGAGACGTTGCCGCGCTGTATACCCAAGTCACCGCGCTGCGCGCCGAGCGTGTCA
AGTCACTGGACACCTATCGCGGTATCGAGAAGCGCACCTTCGCAGATCCGTCGGCGCTCGATGGCGCCGCACTGCATCAA
TACCTCGTGCTGCGCGGCGGAATCCGAGCCGAAGAAAGTGCCATCGATTGGCTCGACGAAGTAGCTGAAGCGCTCCAGGA
GAAGCGATGA

Upstream 100 bases:

>100_bases
CGTTGCACATACACGTCGACCACTTGGCACATGCGTCGGCGTACACGGTCAATATGCACCTAGTTGCATAGCAATCCGGC
TTGCCGTCTATGCTGCCCGG

Downstream 100 bases:

>100_bases
CAAATCCATACCCAAATCTGCTGTCCCCGTTGGACCTTGGGTTTACCACGCTGCGCAACCGGGTGGTTATGGGTTCGATG
CACACCGGACTGGAAGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MALPHAILVSLCEQASSGYELARRFDRSIGYFWTATHQQIYRTLRVMENNNWVRATTVLQHGRPDKKVYAISDSGRAELA
RWIAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAALYTQVTALRAERVKSLDTYRGIEKRTFADPSALDGAALHQ
YLVLRGGIRAEESAIDWLDEVAEALQEKR

Sequences:

>Translated_189_residues
MALPHAILVSLCEQASSGYELARRFDRSIGYFWTATHQQIYRTLRVMENNNWVRATTVLQHGRPDKKVYAISDSGRAELA
RWIAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAALYTQVTALRAERVKSLDTYRGIEKRTFADPSALDGAALHQ
YLVLRGGIRAEESAIDWLDEVAEALQEKR
>Mature_188_residues
ALPHAILVSLCEQASSGYELARRFDRSIGYFWTATHQQIYRTLRVMENNNWVRATTVLQHGRPDKKVYAISDSGRAELAR
WIAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAALYTQVTALRAERVKSLDTYRGIEKRTFADPSALDGAALHQY
LVLRGGIRAEESAIDWLDEVAEALQEKR

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21077; Mature: 20946

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPHAILVSLCEQASSGYELARRFDRSIGYFWTATHQQIYRTLRVMENNNWVRATTVLQ
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEHHHHH
HGRPDKKVYAISDSGRAELARWIAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAA
CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH
LYTQVTALRAERVKSLDTYRGIEKRTFADPSALDGAALHQYLVLRGGIRAEESAIDWLDE
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
VAEALQEKR
HHHHHHHCC
>Mature Secondary Structure 
ALPHAILVSLCEQASSGYELARRFDRSIGYFWTATHQQIYRTLRVMENNNWVRATTVLQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEHHHHH
HGRPDKKVYAISDSGRAELARWIAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAA
CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH
LYTQVTALRAERVKSLDTYRGIEKRTFADPSALDGAALHQYLVLRGGIRAEESAIDWLDE
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
VAEALQEKR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]