Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637099
Identifier: 121637099
GI number: 121637099
Start: 1329431
End: 1330036
Strand: Reverse
Name: 121637099
Synonym: BCG_1229c
Alternate gene names: NA
Gene position: 1330036-1329431 (Counterclockwise)
Preceding gene: 121637100
Following gene: 121637091
Centisome position: 30.4
GC content: 65.68
Gene sequence:
>606_bases ATGACGGTGAGCGCACCCGCAAAGGCCAACCCGTACCGGCGGCGCGGCGAGGTGCTTGAGCGTGCGCTCTACGATGCGAC GCTGGCCGAACTCGAATCCGCCGGATACGGCGGGCTGACCATGGAAGGCATCGCGGCACGCGCCCAAACCGGCAAAGCCG CGTTGTATCGGCGGTGGGCCGGCAAACGTGAGCTGGTGCTGGCCGCGGTGCAATACGCTTTGCCGCCGGTACCCGAGCCG CGCGCTGACCGGTCGGCAAGGGAGAATCTGCTGGCGGTGTTCACCGCCAACTGCGAAATCCTGGCCGGCAAGACGGCCCT CCCCAGCATGGAAATCGTCAGCCAGCTCCTACACGAGCCCGAGCTGCGCGCCATCTTCATCAACTCGGTGTGGGCCCCGC GGCTGCGAATTGTCGAGTCCATCCTGCAGGCGGGCGTGCGTTCCGGCGAAATCGACCCGGCAACTCTGACTCCGATGACC GCACGAATCGGACCGGCCTTGATCCATCAGCATGTCTTGTTTACCGGATCCCCGCCGGACCGTGAGCAGCTCACACGCAT TATCGACGCCATGATCCTCACCACCGGCGAACGCCGCGAGAGCTAG
Upstream 100 bases:
>100_bases TGATACTGCGGTCACCCGCCGCCGGCTAGCAAAAGGGCCTCACCTGATGCATCGATCGAACCGCGCCGGCGGAAAAGCCG CAGTTGGCTAGTATCGCAGC
Downstream 100 bases:
>100_bases CCGACGATTCCGCCGGCGTGACCAGGGCTATTGCCCGGTCTTCACCCATTGGCCGGCGTCGCCGACGATGCCCACTGGCA CCGCACCAGACAGGCTGACG
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEGIAARAQTGKAALYRRWAGKRELVLAAVQYALPPVPEP RADRSARENLLAVFTANCEILAGKTALPSMEIVSQLLHEPELRAIFINSVWAPRLRIVESILQAGVRSGEIDPATLTPMT ARIGPALIHQHVLFTGSPPDREQLTRIIDAMILTTGERRES
Sequences:
>Translated_201_residues MTVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEGIAARAQTGKAALYRRWAGKRELVLAAVQYALPPVPEP RADRSARENLLAVFTANCEILAGKTALPSMEIVSQLLHEPELRAIFINSVWAPRLRIVESILQAGVRSGEIDPATLTPMT ARIGPALIHQHVLFTGSPPDREQLTRIIDAMILTTGERRES >Mature_200_residues TVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEGIAARAQTGKAALYRRWAGKRELVLAAVQYALPPVPEPR ADRSARENLLAVFTANCEILAGKTALPSMEIVSQLLHEPELRAIFINSVWAPRLRIVESILQAGVRSGEIDPATLTPMTA RIGPALIHQHVLFTGSPPDREQLTRIIDAMILTTGERRES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR015893 - InterPro: IPR011075 - InterPro: IPR001647 [H]
Pfam domain/function: PF00440 TetR_N [H]
EC number: NA
Molecular weight: Translated: 21963; Mature: 21831
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEGIAARAQTGKAALYRRWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHC GKRELVLAAVQYALPPVPEPRADRSARENLLAVFTANCEILAGKTALPSMEIVSQLLHEP CCHHHHHHHHHHHCCCCCCCCCCHHHHHCEEEEEECCCEEEECCCCCCCHHHHHHHHCCC ELRAIFINSVWAPRLRIVESILQAGVRSGEIDPATLTPMTARIGPALIHQHVLFTGSPPD CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC REQLTRIIDAMILTTGERRES HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEGIAARAQTGKAALYRRWA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHC GKRELVLAAVQYALPPVPEPRADRSARENLLAVFTANCEILAGKTALPSMEIVSQLLHEP CCHHHHHHHHHHHCCCCCCCCCCHHHHHCEEEEEECCCEEEECCCCCCCHHHHHHHHCCC ELRAIFINSVWAPRLRIVESILQAGVRSGEIDPATLTPMTARIGPALIHQHVLFTGSPPD CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC REQLTRIIDAMILTTGERRES HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]