Click here to switch to the map view.

The map label for this gene is lpqV

Identifier: 121636993

GI number: 121636993

Start: 1217390

End: 1217809

Strand: Reverse

Name: lpqV

Synonym: BCG_1122c

Alternate gene names: 121636993

Gene position: 1217809-1217390 (Counterclockwise)

Preceding gene: 121636996

Following gene: 121636992

Centisome position: 27.84

GC content: 69.76

Gene sequence:

>420_bases
GTGCGCCCGAGCCGTTATGCCCCCCTGCTGTGCGCAATGGTTTTGGCGCTGGCGTGGTTGTCGGCCGTTGCCGGCTGCTC
TCGCGGCGGCAGCAGCAAAGCCGGACGTTCGTCAAGCGTTGCCGGTACGTTGCCGGCGGGCGTCGTCGGCGTCTCCCCGG
CCGGCGTGACCACCAGGGTTGACGCTCCCGCGGAATCGACCGAGGAGGAGTATTACCAGGCCTGTCACGCCGCAAGGCTG
TGGATGGATGCCCAGCCCGGCTCCGGCGAGTCGTTAATCGAGCCGTATCTGGCGGTGGTCCAAGCATCGCCATCCGGAGT
TGCCGGCAGCTGGCACATCCGCTGGGCGGCGCTGACCCCGGCACGGCAGGCGGCCGTGATCGTCGCGGCGCGCGCCGCCG
CCAACGCGGAATGCGGATAA

Upstream 100 bases:

>100_bases
AAAGAGTCGAACGGACAGGGCGGACGGCAGGTCAGGGCCGACAACACCCACAAAATCCGTAGCGCTCCATCACGCGGTCA
GTCTTGCATAGATTGGGACG

Downstream 100 bases:

>100_bases
CGCTCGGCAATTGAGATCAGGGGTGCAAGAAACTAGTGGCCGGATCCCGATAAGGGCACCTCGCCGAGCAGAATGAAAGC
ATGCCCGCACCAGCTGCCCT

Product: putative lipoprotein lpqV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAARL
WMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG

Sequences:

>Translated_139_residues
MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAARL
WMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG
>Mature_139_residues
MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQACHAARL
WMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTPARQAAVIVAARAAANAECG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQV_MYCBO (P65311)

Other databases:

- EMBL:   BX248337
- RefSeq:   NP_854748.1
- EnsemblBacteria:   EBMYCT00000017326
- GeneID:   1092115
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb1093c
- GeneTree:   EBGT00050000017764
- HOGENOM:   HBG566515
- OMA:   ACHAAKV
- ProtClustDB:   CLSK790929
- BioCyc:   MBOV233413:MB1093C-MONOMER
- InterPro:   IPR020377
- ProDom:   PD076648

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14110; Mature: 14110

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
ARQAAVIVAARAAANAECG
CHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPSRYAPLLCAMVLALAWLSAVAGCSRGGSSKAGRSSSVAGTLPAGVVGVSPAGVTTRV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
DAPAESTEEEYYQACHAARLWMDAQPGSGESLIEPYLAVVQASPSGVAGSWHIRWAALTP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
ARQAAVIVAARAAANAECG
CHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972