Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636964
Identifier: 121636964
GI number: 121636964
Start: 1189403
End: 1189792
Strand: Reverse
Name: 121636964
Synonym: BCG_1092c
Alternate gene names: NA
Gene position: 1189792-1189403 (Counterclockwise)
Preceding gene: 121636965
Following gene: 121636963
Centisome position: 27.2
GC content: 68.21
Gene sequence:
>390_bases GTGCAGCAGGGCAACCCACCCGATGCGCCGCAGCTGGCGCCAGCGGTGGCGTGGGTGAAAAAGCGCGCCGGACGCACGCC GCGCACCGTCACCGCCGACCGCGGCTATGGCGAAGCCGCCGTCGACCAGCAGCTCACCGAGGTGGGCGTCAAGAATGTGC TGATCCCGCGCAAAGGCAAACCTTCGCAGGATCGACGCGCCGAAGAACACCGAAAAGCGTTCCGCCGCACCATCAAATGG CGGACCGGATGCGAAGGCCGGATCAGCCACCTCAAACGCGGCTACGGCTGGGACCGCGGCCGGATCGGCGGTCTCGAAGG CACCCGGACCTGGGTCGGACACGGCGTGTTCGCCCACAACCTGGTCACGATCAGCGCCCTCCCCGCATAA
Upstream 100 bases:
>100_bases GCCCGCCCCGATCACCAAGGGTCGGCTCGGTAAGCCGGTCGAGTTTGAGCACAAGGCCCAGGTCGTCGACAACGATGACG GGATTGTGCTGGATCACACT
Downstream 100 bases:
>100_bases CCGGTCCACCGGGGGCTCCGTATACCCGGAAACCGAGATCCGCTTTCTCACCGCCGAAGCCCGACATCCCGCCCGGTCAC CTTTTCAGGCCGAAGTAACT
Product: putative transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Transposase IS4 Family Protein; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKW RTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA
Sequences:
>Translated_129_residues MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKW RTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA >Mature_129_residues MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKW RTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14286; Mature: 14286
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCC PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHH LVTISALPA EEEEEECCC >Mature Secondary Structure MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCC PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHH LVTISALPA EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA