Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636728
Identifier: 121636728
GI number: 121636728
Start: 928503
End: 929132
Strand: Direct
Name: 121636728
Synonym: BCG_0856
Alternate gene names: NA
Gene position: 928503-929132 (Clockwise)
Preceding gene: 121636727
Following gene: 121636729
Centisome position: 21.23
GC content: 71.59
Gene sequence:
>630_bases ATGAGTCGGCTTCGCGCCCTGTCTTTGGCCGCCGGCCTGGTCGGCTGGAGTCTGGTCAGCCCGCGGCTGCCGGCGCCGTG GCGGATTCCGTTGCAGGCGGGGCTGGGGAGCGTGTTGGTGCTGGTTACTCGTGCGACGATGGGCCTTTGGCCGCCGCGGC TGTGGGCCGGGCTGCGGCTGGGCTGGGCCGCGGGGGCGGCGGCGGCGACCGCGATCGCGGCAACGACGCCGGTGCCGATG GTGCGGTTGTCGATGTCGGCTCGTGAGTTGCCGGCGTCGGTGCCGGTCTGGCTGGTATGGCACATACCTGGCGGCACGGT GTGGGCCGAGGAGGCCGCGTTTCGCGGGGCGCTGGCCACTATCGGTGCCCGGGCCTTCGGTCGGTCGGGTGGACGGATAC TGCAGGCCGGCGCCTTTGGTTTGTCTCACATCGCCGACGCGCGCGCGACGGGCGAGCCGCTGGTGCTCACGGTGTTGGCC ACCGGTATCGCCGGCTGGATGTTCGGTTGGCTGGCCGACCGGTCCGGCAGTCTGGCAGCACCGCTGCTGACGCACTTGGC CATCAACGAGGCCGGTGCGGTCGCCGCGGTGCTGGTCCAGCGGCGTTCTGGTATCTCGACTCGACTGTGA
Upstream 100 bases:
>100_bases TCGATCAAGGTTCGGACGCGGTTGAGGTGCAGGGCTTGTTCGCGGTGTCGTTGGCCGAACTGCGTGCGACATCCGAGGCG GTGTTGCCGCGATACTTCGG
Downstream 100 bases:
>100_bases TCGCGGGGTCGGGCCCCTGGTGATCGTGGAACGGCTCACAACAGCGCGGACCTGGTCGGCGGCGCCGCTATACTGATTGG TCACTGTCTAACCAATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Protease; Caax Amino Protease Family Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSRLRALSLAAGLVGWSLVSPRLPAPWRIPLQAGLGSVLVLVTRATMGLWPPRLWAGLRLGWAAGAAAATAIAATTPVPM VRLSMSARELPASVPVWLVWHIPGGTVWAEEAAFRGALATIGARAFGRSGGRILQAGAFGLSHIADARATGEPLVLTVLA TGIAGWMFGWLADRSGSLAAPLLTHLAINEAGAVAAVLVQRRSGISTRL
Sequences:
>Translated_209_residues MSRLRALSLAAGLVGWSLVSPRLPAPWRIPLQAGLGSVLVLVTRATMGLWPPRLWAGLRLGWAAGAAAATAIAATTPVPM VRLSMSARELPASVPVWLVWHIPGGTVWAEEAAFRGALATIGARAFGRSGGRILQAGAFGLSHIADARATGEPLVLTVLA TGIAGWMFGWLADRSGSLAAPLLTHLAINEAGAVAAVLVQRRSGISTRL >Mature_208_residues SRLRALSLAAGLVGWSLVSPRLPAPWRIPLQAGLGSVLVLVTRATMGLWPPRLWAGLRLGWAAGAAAATAIAATTPVPMV RLSMSARELPASVPVWLVWHIPGGTVWAEEAAFRGALATIGARAFGRSGGRILQAGAFGLSHIADARATGEPLVLTVLAT GIAGWMFGWLADRSGSLAAPLLTHLAINEAGAVAAVLVQRRSGISTRL
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21629; Mature: 21498
Theoretical pI: Translated: 12.60; Mature: 12.60
Prosite motif: PS01151 FIMBRIAL_USHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRALSLAAGLVGWSLVSPRLPAPWRIPLQAGLGSVLVLVTRATMGLWPPRLWAGLRL CCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHH GWAAGAAAATAIAATTPVPMVRLSMSARELPASVPVWLVWHIPGGTVWAEEAAFRGALAT HHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH IGARAFGRSGGRILQAGAFGLSHIADARATGEPLVLTVLATGIAGWMFGWLADRSGSLAA HHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH PLLTHLAINEAGAVAAVLVQRRSGISTRL HHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRLRALSLAAGLVGWSLVSPRLPAPWRIPLQAGLGSVLVLVTRATMGLWPPRLWAGLRL CHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHH GWAAGAAAATAIAATTPVPMVRLSMSARELPASVPVWLVWHIPGGTVWAEEAAFRGALAT HHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH IGARAFGRSGGRILQAGAFGLSHIADARATGEPLVLTVLATGIAGWMFGWLADRSGSLAA HHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH PLLTHLAINEAGAVAAVLVQRRSGISTRL HHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA