Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636707
Identifier: 121636707
GI number: 121636707
Start: 910421
End: 911107
Strand: Direct
Name: 121636707
Synonym: BCG_0835
Alternate gene names: NA
Gene position: 910421-911107 (Clockwise)
Preceding gene: 121636705
Following gene: 121636708
Centisome position: 20.81
GC content: 68.27
Gene sequence:
>687_bases GTGTCGGTCTCGGGGATAGGTGAGAGCACCCTGGCCGATGTCGACGCGTTCTGCGCGGAAATGGACGCCCGCTCGGTGCC GGTATCGTTGCTGGTGGCTCCGCGTATGCGCGATGACTACCGGCTCGACCGCGACCCACGCACCGTCGACTGGCTGACCG GTCGCCGGGCCGCCGGCGACGCTCTGGTACTGCATGGCTACGACGAAGCGGCCACCAAGAGGCGGCGCGGCGAATTCGCA ATGCTGCGCGCACACGAGGCCAACCTGCGGCTGATGGCCGCCGACCGGGTGCTCGAACACCTTGGGCTGCGAACCCGACT GTTTGCGGCACCGGGCTGGCTGGTATCACCAGGTGTCCGTACAGCGTTGCCGGCCAATGGATTTCGGCTGCTTGCGGATC TCCATGGAATCACGGATCTGGTTCGGCTCACCACCGTGCGTGCCCGCGTGCTGGGCATCGGCGAGGGTTTCCTGGCGGAG CCCTGGTGGTGCCGGATGGTGGTGATGTCGGCCGAGCGGATCGCCCGGCGTGGGGGCGTCGTCCGGATTGCGGTGGCCGC CCGTCATTTGCGCAAGTCCGGTCCGCTGCAGGCGATGCTCGATGCCGTCGACCTGGCGATGCTGCAGGGGTGCACACCGA TGGTGTACCGGTGGCGAGCCGATGCGGCGGTACTCGACGCGGCCTGA
Upstream 100 bases:
>100_bases TGCGCTGGTCAGGGTCCAGATATACGCCTGCTGTCCGCGTGTCCTTCACCGTCCGGAAACCTGGAATCGGCAGACTGCAA GCGTGTCTGGAAAACTGCTC
Downstream 100 bases:
>100_bases CCGAGCGCCTGATCGGTGGCGTTAACCTGTACCGACATGAGCGATGCTGTAGCCGGTTCAGATGCCGAGGGGCTCACCGC TGATGCCATTGTCGTGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Deacetylase-Like Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFA MLRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVRLTTVRARVLGIGEGFLAE PWWCRMVVMSAERIARRGGVVRIAVAARHLRKSGPLQAMLDAVDLAMLQGCTPMVYRWRADAAVLDAA
Sequences:
>Translated_228_residues MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFA MLRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVRLTTVRARVLGIGEGFLAE PWWCRMVVMSAERIARRGGVVRIAVAARHLRKSGPLQAMLDAVDLAMLQGCTPMVYRWRADAAVLDAA >Mature_227_residues SVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFAM LRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVRLTTVRARVLGIGEGFLAEP WWCRMVVMSAERIARRGGVVRIAVAARHLRKSGPLQAMLDAVDLAMLQGCTPMVYRWRADAAVLDAA
Specific function: Unknown
COG id: COG3233
COG function: function code R; Predicted deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25053; Mature: 24921
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGD CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHCCCCCCCC ALVLHGYDEAATKRRRGEFAMLRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVR EEEEECCCHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHCCHHEEEECCCCEECCCCC TALPANGFRLLADLHGITDLVRLTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCE VRIAVAARHLRKSGPLQAMLDAVDLAMLQGCTPMVYRWRADAAVLDAA EEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHEEEEECCCEEECCC >Mature Secondary Structure SVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGD CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHCCCCCCCC ALVLHGYDEAATKRRRGEFAMLRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVR EEEEECCCHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHCCHHEEEECCCCEECCCCC TALPANGFRLLADLHGITDLVRLTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCE VRIAVAARHLRKSGPLQAMLDAVDLAMLQGCTPMVYRWRADAAVLDAA EEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA