Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636683
Identifier: 121636683
GI number: 121636683
Start: 885608
End: 885940
Strand: Reverse
Name: 121636683
Synonym: BCG_0811c
Alternate gene names: NA
Gene position: 885940-885608 (Counterclockwise)
Preceding gene: 121636684
Following gene: 121636680
Centisome position: 20.25
GC content: 62.46
Gene sequence:
>333_bases GTGGCGTTCTTGACGATTGAGCCGATGACGCAAGGCCACACCTTGGTGGTGCCACGCGCCGAAATCGACCACTGGCAAAA CGTGGATCCCGCGTTATTTGGCCGCGTCATGTCGGTGAGCCAGCTGATCGGCAAGGCCGTGTGCCGGGCGTTTTCAACCC AACGCGCCGGGATGATCATTGCCGGGCTGGAAGTGCCCCACCTACACATCCACGTGTTTCCCACCCGCAGCCTCAGTGAT TTCGGCTTTGCCAACGTCGACCGCAACCCCTCACCGGGATCGCTGGACGAAGCGCAGGCCAAGATCAGGGCGGCCCTGGC ACAACTGGCGTGA
Upstream 100 bases:
>100_bases GGGGGCCGTTGCGACGTCATATGCTCAACGGGTGTCGATCTTCACCAAGATCATCAACCGTGAACTGCCCGGCCGTTTCG TCTACGAGGACGACGACGTC
Downstream 100 bases:
>100_bases GGCTCAGCTGGTCCACGTCACTGACGCGCGGCAGCGAGACACGAAAGCAGCAACCCTCCCCGAGCGCGGTCGTCACGGTG ACCGCTCCGCCATGGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSVSQLIGKAVCRAFSTQRAGMIIAGLEVPHLHIHVFPTRSLSD FGFANVDRNPSPGSLDEAQAKIRAALAQLA
Sequences:
>Translated_110_residues MAFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSVSQLIGKAVCRAFSTQRAGMIIAGLEVPHLHIHVFPTRSLSD FGFANVDRNPSPGSLDEAQAKIRAALAQLA >Mature_109_residues AFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSVSQLIGKAVCRAFSTQRAGMIIAGLEVPHLHIHVFPTRSLSDF GFANVDRNPSPGSLDEAQAKIRAALAQLA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 11959; Mature: 11828
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSVSQLIGKAVCRAFSTQRAGMII CCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AGLEVPHLHIHVFPTRSLSDFGFANVDRNPSPGSLDEAQAKIRAALAQLA ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSVSQLIGKAVCRAFSTQRAGMII CEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AGLEVPHLHIHVFPTRSLSDFGFANVDRNPSPGSLDEAQAKIRAALAQLA ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]