Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636515
Identifier: 121636515
GI number: 121636515
Start: 726553
End: 727788
Strand: Reverse
Name: 121636515
Synonym: BCG_0643c
Alternate gene names: NA
Gene position: 727788-726553 (Counterclockwise)
Preceding gene: 121636516
Following gene: 121636514
Centisome position: 16.64
GC content: 67.15
Gene sequence:
>1236_bases ATGGGAGTCGTCGAACGCGCGATCGCGCCCTCGGTGCTGGCCGCGCTCGCCGACACCCCGGTCGTCGTTGTCAACGGCGC GCGTCAGGTCGGCAAAACAACACTGGTCGCGCGACTTGACTATCCGGGATCCAGCGAAGTCGTCTCGCTTGACGACGTCG CCAACCGCGACGCCGCCCGCGACGATCCCCGCGCATTCGTATCCCGGCCGGTGGACACGCTCGTCATCGACGAAGCCCAG CTCGAGCCGGGGCTGTTTCGGGCGATCAAGGCAGAGGTCGACCGGGATCGCAGGCCGGGCAGGTTCCTGCTCACGGGTTC AGCGAGGCTGCTCTCGGCTCCTGACATGGCCGACGCGCTCGTCGGGCGGGTCGAAATCATCGAACTCTGGCCGTTCTCGC AAGGTGAGCGGGCCGGAATCGCGGACGGTTTCGTCGATGCGCTGTTCACCGCACCACGCGAGCTGATCCACGGCTCCGAT ATGCGCCGCGCCGATCTGGTCGACAGGATCGCCACCGGAGGCTTCCCGGACATCGTCGCCCGATCGCCGTCGAGGCGTCG CGCGTGGTTCGACAACTATCTCACGACGGCGACGCAGTCGGTGATCCGCGAGATTTCGCCGATCGAGCGGCTTGCCGAAA TGCCGCGTGTGCTTCGGCTCTGCGCCGCGCGTACCGGCGCCGAGCTCAACGTGAGCGCACTGGCGAACGACCTGTCGATC CCGGCTCGCACCACCGCTGGCTATCTGGCCCTGCTGGAAGCGGCGTTCCTTATCCACCGGGTGCCGGCCTGGTCGACCAA CCTGAGCCGCAAGGTGATTCGCCGACCGAAACTGGTGGTCTCGGACAGTGGCCTGGCGTGTCACCTGCTCGGCGTTACCG GTGCGACGCTGGATCGCCCCGGCCGTCCACTCGGCCCGCTACTGGAGACTTTCGTGGCGAACGAGATTCGCAAACAGCTC ACCTGGTCGACCGAACGGCCGAGTCTGTGGCATTTTCGCGACCGCGGCGGCGCCGAGGTCGATCTGGTGCTCGAACATCC CGATGGTCGGGTCTGCGGCATCGAGGTCAAGGCGACCAGCACGCCGCGAGCCGAGGACCTGCGTGGCCTACGTTATCTGG CCGAGCGGCTCGATGATCGATTTCAGTTCGGCGTGCTGCTCACCGCCGCGCCGGAAGCCACCCCGTTCGGCCCAACGCTC GCGGCGTTACCCGTTAGCACGCTCTGGGCCGGCTAA
Upstream 100 bases:
>100_bases GTCGGACGGATCCGCAGCGATGATGTGGACTAATCCGCACCGCTAATGGGGACGAATCGGCAGCCAATAGGTAGACAAAT CGGCAGCGTATTCTGTCCGC
Downstream 100 bases:
>100_bases CTCTTCGAACAAATCACGGCACTTCGGCATCGGCGGCCTCCGTCCGGGCGCGCTCGCAATCTACCCCGACGGGCCCACCA TCGCGGGCGACTGCGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVIDEAQ LEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD MRRADLVDRIATGGFPDIVARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEIRKQL TWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTL AALPVSTLWAG
Sequences:
>Translated_411_residues MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVIDEAQ LEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD MRRADLVDRIATGGFPDIVARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEIRKQL TWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTL AALPVSTLWAG >Mature_410_residues GVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDDPRAFVSRPVDTLVIDEAQL EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADALVGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDM RRADLVDRIATGGFPDIVARSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSIP ARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRPGRPLGPLLETFVANEIRKQLT WSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLA ALPVSTLWAG
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 [H]
Pfam domain/function: PF08279 HTH_11 [H]
EC number: NA
Molecular weight: Translated: 44695; Mature: 44563
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR CCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEEECCCCCCCEEEHHHHCCCCCCC DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL CCCHHHHHCCCHHEEEEHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHH VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA HCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHC RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCC PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCC GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEECC TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG CCCHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCHHHCCHHHHCCC >Mature Secondary Structure GVVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAAR CHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEEECCCCCCCEEEHHHHCCCCCCC DDPRAFVSRPVDTLVIDEAQLEPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL CCCHHHHHCCCHHEEEEHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHH VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSDMRRADLVDRIATGGFPDIVA HCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHC RSPSRRRAWFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALANDLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCC PARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGATLDRP CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCC GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIEVKATS CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEECC TPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG CCCHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]