Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636489
Identifier: 121636489
GI number: 121636489
Start: 694377
End: 695708
Strand: Reverse
Name: 121636489
Synonym: BCG_0616c
Alternate gene names: NA
Gene position: 695708-694377 (Counterclockwise)
Preceding gene: 121636490
Following gene: 121636484
Centisome position: 15.9
GC content: 66.44
Gene sequence:
>1332_bases ATGAAGCTCTTTGACGATCGTGGCGACGCTGGACGCCAGTTGGCGCAACGCCTGGCGCAGCTATCCGGCAAGGCCGTCGT CGTCCTTGGCTTGCCGCGCGGCGGGGTACCGGTGGCCTTTGAGGTCGCCAAGTCACTGCAAGCGCCACTCGACGTCCTGG TCGTGCGCAAGCTTGGCGTGCCGTTCCAACCCGAATTGGCTTTCGGCGCCATCGGTGAGGACGGCGTGCGGGTGCTCAAC GACGACGTCGTCCGCGGGACACACCTCGATGCTGCCGCCATGGACGCGGTCGAACGCAAGCAGCTGATCGAGCTACAACG CCGCGCGGAACGCTTCCGCCGCGGGCGTGACCGCATCCCGTTGACCGGGCGGATCGCGGTGATCGTCGATGACGGCATCG CCACCGGAGCGACGGCCAAGGCGGCGTGCCAGGTCGCCCGGGCGCACGGTGCGGACAAGGTGGTGCTGGCGGTCCCGATC GGCCCAGACGACATCGTGGCGAGATTCGCCGGGTACGCCGATGAGGTGGTGTGTTTGGCGACGCCGGCGTTGTTCTTCGC CGTCGGGCAGGGTTACCGCAACTTCACCCAGACCTCCGACGACGAGGTGGTGGCGTTTCTGGATCGTGCTCACCGCGACT TCGCCGAGGCAGGTGCGATCGATGCCGCCGCTGACCCACCGCTTCGCGATGAGGAGGTCCAGGTCGTTGCCGGTCCAGTA CCGGTGGCAGGGCACCTGACTGTCCCCGAAAAACCCAGGGGAATTGTGGTTTTAGCACATGGCAGTGGCAGCAGCCGGCA CAGTATCCGCAATCGGTACGTTGCAGAGGTCTTGACCGGGGCCGGGTTTGCGACGCTGTTATTCGACTTGCTCACGCCCG AAGAAGAACGCAACCGCGCCAACGTCTTCGACATTGAGCTGCTCGCTTCCCGACTCATCGACGTGACCGGTTGGTTGGCC ACCCAGCCCGACACCGCATCGCTGCCGGTCGGCTACTTCGGCGCCAGCACGGGAGCGGGTGCGGCGCTGGTCGCGGCCGC CGATCCGCGCGTGAACGTGCGGGCGGTGGTGTCCCGCGGCGGCCGGCCCGATCTCGCGGGTGATTCGCTGGGGAGCGTGG TGGCACCGACGCTGCTGATCGTGGGTGGACGCGACCAGGTGGTCCTCGAGCTGAACCAACGAGCGCAAGCGGTAATACCC GGGAAATGCCAACTCACCGTGGTCCCCGGCGCCACACACCTATTCGAAGAACCAGGCACGCTGGAACAGGTTGCCAAGCT GGCGTGCGATTGGTTCATCGACCACTTGTGCGGCCCAGGCCCAAGCGGCTAA
Upstream 100 bases:
>100_bases CAAGGCGGGATGCGCAATCCGGTCGCTGAGGGACTGTCGTCAGTCGGCCCAGGGACCTAATTCCATATTTGGAGCCATGA GATGGCGACACACTCGGCAG
Downstream 100 bases:
>100_bases ACCGCTAGCCGGCCGGGGTGATCCCTGCGATCCCTGCGCGAGCAGACGCAGAATCGCATCAAAATCGCTGATTTTGTGCG ATTCTGCGTCTGCTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVLAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG
Sequences:
>Translated_443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVLAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG >Mature_443_residues MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGVPFQPELAFGAIGEDGVRVLN DDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIPLTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPI GPDDIVARFAGYADEVVCLATPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV PVAGHLTVPEKPRGIVVLAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRANVFDIELLASRLIDVTGWLA TQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRGGRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIP GKCQLTVVPGATHLFEEPGTLEQVAKLACDWFIDHLCGPGPSG
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 46622; Mature: 46622
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCC PFQPELAFGAIGEDGVRVLNDDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIP CCCCCCEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPIGPDDIVARFAGYADEVVCLA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHH TPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC PVAGHLTVPEKPRGIVVLAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRA CCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCC NVFDIELLASRLIDVTGWLATQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRG CEEHHHHHHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCC GRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIPGKCQLTVVPGATHLFEEPGT CCCCCCCCCHHHHHHCEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCHHHHCCCCH LEQVAKLACDWFIDHLCGPGPSG HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLFDDRGDAGRQLAQRLAQLSGKAVVVLGLPRGGVPVAFEVAKSLQAPLDVLVVRKLGV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCC PFQPELAFGAIGEDGVRVLNDDVVRGTHLDAAAMDAVERKQLIELQRRAERFRRGRDRIP CCCCCCEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LTGRIAVIVDDGIATGATAKAACQVARAHGADKVVLAVPIGPDDIVARFAGYADEVVCLA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHH TPALFFAVGQGYRNFTQTSDDEVVAFLDRAHRDFAEAGAIDAAADPPLRDEEVQVVAGPV HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC PVAGHLTVPEKPRGIVVLAHGSGSSRHSIRNRYVAEVLTGAGFATLLFDLLTPEEERNRA CCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCC NVFDIELLASRLIDVTGWLATQPDTASLPVGYFGASTGAGAALVAAADPRVNVRAVVSRG CEEHHHHHHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCC GRPDLAGDSLGSVVAPTLLIVGGRDQVVLELNQRAQAVIPGKCQLTVVPGATHLFEEPGT CCCCCCCCCHHHHHHCEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCHHHHCCCCH LEQVAKLACDWFIDHLCGPGPSG HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]