Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636360
Identifier: 121636360
GI number: 121636360
Start: 565260
End: 566030
Strand: Reverse
Name: 121636360
Synonym: BCG_0485c
Alternate gene names: NA
Gene position: 566030-565260 (Counterclockwise)
Preceding gene: 121636361
Following gene: 121636359
Centisome position: 12.94
GC content: 65.24
Gene sequence:
>771_bases GTGGTAACCAGCGTGTCGGCTTTGGCTGTGGCCGTGGTGCATTCGGTGGCGTTTGCGATCGGCCGCCGCATCGGCCGGTA CAACGTCGTCGACGTGGTATGGGGCTTGGGTTTCGTCGCCGTCGCCGTCGCCGCCGCGACGCTCGGCCACGGCGACCCGG TTCGCCGATGGCTGCTACTAGCGTTGGTGTCGACCTGGGGTCTGCGGCTGAGCTGGCACATGTACCGCAAGACAGCCGGT CAGGGGGAGGATCCCCGCTACGCCGACCTGCTGCGCGGTGCCACGCCTGTGCAGGCATTGCGCAAGGTCTTCGGATTACA GGGCCTCCTGACGTTGTTCGTCTCATTCCCGCTGCAGCTTTCCGCAGTCACCGGGCCGACGCCGAAGCCGTTACTGGCTG TTGGGGGCGTGGGCTTAGCCGTGTGGCTGGTCGGTATCACCTTCGAAGCGGTGGGAGATTGGCAACTGTGGGTATTCAAA TCCGACCCGGCCAATCGCGGGGTCATCATGGACCGCGGCCTGTGGGCCTGGACGCGTCACCCCAACTACTTCGGCGATGC CTGTGTCTGGTGGGGGTTGTGGTTGATCACGATCAACGACTGGGCGCCGCTGGCCACGGTGGGTTCGCCGCTGCTGATGA CCTACCTGCTGGTGGACGTCAGCGGAGCCCGGCTGACTGAGAGATACCTGAAGGGTCGCCCCGGTTTCGCCGAATATCAA AGGCGAACAGCCTATTTCGTGCCCCGGCCACCGCGATCGGCGCGTCGGTGA
Upstream 100 bases:
>100_bases GGGAGCTGTACCTGGCGTACTCGGAGGCGGGCTTCCGGTCGGGCTATCTGGACGTCTACCAGTGGACGTTGATCCGCGAG GGCCCCCCGTGAACATCGTC
Downstream 100 bases:
>100_bases TGACCGGCTTGACCATCTCGGCGCCGGCTGGCGATAGGCTACCCATCGATAACCGGACCGCCACGGCTGAGCAGCGACCT GGACGCCCTGTTGCGCCGGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAG QGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFK SDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ RRTAYFVPRPPRSARR
Sequences:
>Translated_256_residues MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAG QGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFK SDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ RRTAYFVPRPPRSARR >Mature_256_residues MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAG QGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFK SDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ RRTAYFVPRPPRSARR
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=269, Percent_Identity=27.1375464684015, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI28574404, Length=269, Percent_Identity=27.1375464684015, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI21355723, Length=269, Percent_Identity=27.1375464684015, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28253; Mature: 28253
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL HHHHHHCHHEEHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH EECCCCCCCCHHHCCHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEECCCEEEECC PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ CCCCCCHHHHHHEEEEEECCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH RRTAYFVPRPPRSARR HCCEEECCCCCCCCCC >Mature Secondary Structure MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL HHHHHHCHHEEHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH EECCCCCCCCHHHCCHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEECCCEEEECC PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ CCCCCCHHHHHHEEEEEECCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH RRTAYFVPRPPRSARR HCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA