Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636340
Identifier: 121636340
GI number: 121636340
Start: 546188
End: 546631
Strand: Reverse
Name: 121636340
Synonym: BCG_0465c
Alternate gene names: NA
Gene position: 546631-546188 (Counterclockwise)
Preceding gene: 121636341
Following gene: 121636339
Centisome position: 12.5
GC content: 68.47
Gene sequence:
>444_bases ATGAGTGTGGTCGGCGGGACAGTTCGAACCGTGGGGCGAACGGTGAGTGGTGCAGCAACGGCGACCACAGCGGCCGCGGG TGCGGTGGGTGGCGCCGCCGTGAGCGGCATCGTCGGCGGTGTGACCGGAGCCGCCAAAGGCATTCAGAAGGGGCTTAGCA GCGGCAGCAAGTCGACCGCGGCAGCCGCGTTGGCCATCGGTGCGATCGGTGTCGCTGGACTCGTCGATTGGCCGATCCTG TTGGCCGTGGGCGGCGGAGCGTTGCTATTGCGGAAGCTCAACCGCACCCCCGAGGTGGCCGCACCGCCGGTGAAGGCGAA ACTTGCGCCGGTGCCCGACAAGCCGGCTGCCGCAAAGGAAGCGCCAGCCAAAGCGAGCAAGACAACAGCCAGGAAGACGA GCGGTCGCCGAGCGGGCACCGCTGAGCTGCGCAGCACCAACTAG
Upstream 100 bases:
>100_bases GAAATCTCGTCAGCGGTGCGAATGCAGGGTGCGGGTTAACGAGTGTAGAACTGTAGCTAAACCATTTGTAAACGAATGCA GTTTGGGCCAGGGAGTCATC
Downstream 100 bases:
>100_bases TCTGGCGGCGTTGAGCAACTCTTGAGCATTGCTGCATCCATCGCACGGGCTATGCCGGTGCGTGCTGTCGCCACGGGCTT CCGGGCGACCGCCACCCTTA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAAKGIQKGLSSGSKSTAAAALAIGAIGVAGLVDWPIL LAVGGGALLLRKLNRTPEVAAPPVKAKLAPVPDKPAAAKEAPAKASKTTARKTSGRRAGTAELRSTN
Sequences:
>Translated_147_residues MSVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAAKGIQKGLSSGSKSTAAAALAIGAIGVAGLVDWPIL LAVGGGALLLRKLNRTPEVAAPPVKAKLAPVPDKPAAAKEAPAKASKTTARKTSGRRAGTAELRSTN >Mature_146_residues SVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAAKGIQKGLSSGSKSTAAAALAIGAIGVAGLVDWPILL AVGGGALLLRKLNRTPEVAAPPVKAKLAPVPDKPAAAKEAPAKASKTTARKTSGRRAGTAELRSTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13930; Mature: 13799
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAAKGIQKGLSSGSKSTA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAALAIGAIGVAGLVDWPILLAVGGGALLLRKLNRTPEVAAPPVKAKLAPVPDKPAAAKE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC APAKASKTTARKTSGRRAGTAELRSTN CCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SVVGGTVRTVGRTVSGAATATTAAAGAVGGAAVSGIVGGVTGAAKGIQKGLSSGSKSTA CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAALAIGAIGVAGLVDWPILLAVGGGALLLRKLNRTPEVAAPPVKAKLAPVPDKPAAAKE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC APAKASKTTARKTSGRRAGTAELRSTN CCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA