Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636125
Identifier: 121636125
GI number: 121636125
Start: 284540
End: 285853
Strand: Reverse
Name: 121636125
Synonym: BCG_0250c
Alternate gene names: NA
Gene position: 285853-284540 (Counterclockwise)
Preceding gene: 121636127
Following gene: 121636124
Centisome position: 6.53
GC content: 61.87
Gene sequence:
>1314_bases ATGTCGATCAAGGCATACGCCAAGACCCAAGGGATCGCAGTCACCTCCGTCAACGGCCTGGTCGCCGGCCACGGGTCCGT GCAGGAGACGTGGCTGGCCATGCAAAGCGCCGCCGCCTTATCAGGAACGCCCCGGCTTGTCGGCTTTTCCTGCATCGACA CATTTCCGGAGGTGTTGTGGTTGGCGCAGCGCGCGAGACAGGCCTGGGATGGCGTGCGCATCGTCATCGGGAATGCGATG GCAACACTGAACTACGAGCGCATCCTGCGCCAGCATGACTGTTTCGACTACGTCGTCGTTGGCGACGGGGAGGTAGCGTT CACCAAGCTGGCCTTGGCCCTGGCGAATGACGCTGCGGTTGACGACGTCCCGGGACTAGCCCGCCGTAGTGAGCAGGGAC AGATCCTGCGCACACCCTCCTCGCTGGTCGACCTTGACGAGTTGCCTCGCCCGGCTCGCGACGAGTTGCCGACCGTCCTT GCTGATGGCTTCGCCGCCTCCGTCTTTTCCACCCGCGGATGCCCCTACCGCTGCACGTTCTGCGGCACCGGGGCCATGTC CGCGATGCTAGGGAAGGACAGCTACCGGGCGAAGTCGGTTGACGCGGTCGTCGACGAGATCGATTATCTGGTGTCGGACT ACGACGTCAACTTCCTATCCATCACCGACGACCTGTTTATCTCCAAACACCCCGGTTCGCAGCAACGCGCCGCTGACTTT GCCAACGCGGTACTCAGGAGGGGGATCAGCGTCAACTTCATGGTCGATATCCGGCTGGACTCCGTTGTCGATCTGGACTT GTTCAAACATCTGCACAGGGCGGGCCTGCGTCGGGTATTCATCGGCGTGGAGACTGGGTCCTACGAGCAACTGCGCGCCT ACCGCAAGCAGATCCTCACTCGTGGACAAGATGCCGCCGACACGATCAACGCCCTGCAACAGCTCGGCATTGACGTTATC CCGGGCACCATTATGTTTCACCCCACCGTGCAGCCCGACGAGCTACGCGAAACAGTCCGCCTGCTGCGGGCAACAAAGTA TACGGTCGGCTTCAAGTTCATGAGCCGGATCGTCCCCTATCCGGGAACGCCGTTGTACCAAGCGTACTCGGACGCGGGTT ATCTCACCGCGAAATGGCCCCTCGGTCAGTGGGAATTCGTCGACCCAGAGGCCTCCCGGGTCTACGCCGACGTCGTAGCC AAGGTCGCTCCTGACGTCGGAATCAGCTTCGATGAGGCTGAGGCGTACTTTCTTTCGCGGCTGGACGAGTGGGAGAATGT CATCGCCGGCCGAATCGCTGAGGCGACGTCGTGA
Upstream 100 bases:
>100_bases TCCTCCAGGCGTCCGTCAAGACGGGCTGTCGTACGTTGACGGACTCAAGCTTGGAGATCCGTGGCTGTATTGCTCCATGC CCATGGAGCACCTCGGGATG
Downstream 100 bases:
>100_bases CACACGGAATGGTGCTCGGCAAGTTCATGCCGCCCCATGCGGGACACGTCTACCTTTGCGAGTTCGCGCGGCGATGGGTG GATGAGCTGACCATCGTCGT
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPRLVGFSCIDTFPEVLWLAQRARQAWDGVRIVIGNAM ATLNYERILRQHDCFDYVVVGDGEVAFTKLALALANDAAVDDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVL ADGFAASVFSTRGCPYRCTFCGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSITDDLFISKHPGSQQRAADF ANAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFIGVETGSYEQLRAYRKQILTRGQDAADTINALQQLGIDVI PGTIMFHPTVQPDELRETVRLLRATKYTVGFKFMSRIVPYPGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVVA KVAPDVGISFDEAEAYFLSRLDEWENVIAGRIAEATS
Sequences:
>Translated_437_residues MSIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPRLVGFSCIDTFPEVLWLAQRARQAWDGVRIVIGNAM ATLNYERILRQHDCFDYVVVGDGEVAFTKLALALANDAAVDDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVL ADGFAASVFSTRGCPYRCTFCGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSITDDLFISKHPGSQQRAADF ANAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFIGVETGSYEQLRAYRKQILTRGQDAADTINALQQLGIDVI PGTIMFHPTVQPDELRETVRLLRATKYTVGFKFMSRIVPYPGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVVA KVAPDVGISFDEAEAYFLSRLDEWENVIAGRIAEATS >Mature_436_residues SIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPRLVGFSCIDTFPEVLWLAQRARQAWDGVRIVIGNAMA TLNYERILRQHDCFDYVVVGDGEVAFTKLALALANDAAVDDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVLA DGFAASVFSTRGCPYRCTFCGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSITDDLFISKHPGSQQRAADFA NAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFIGVETGSYEQLRAYRKQILTRGQDAADTINALQQLGIDVIP GTIMFHPTVQPDELRETVRLLRATKYTVGFKFMSRIVPYPGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVVAK VAPDVGISFDEAEAYFLSRLDEWENVIAGRIAEATS
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 48054; Mature: 47923
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPRLVGFSCIDTFPEVLW CCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH LAQRARQAWDGVRIVIGNAMATLNYERILRQHDCFDYVVVGDGEVAFTKLALALANDAAV HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCC DDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVLADGFAASVFSTRGCPYRCTF CCCCCHHHCCCCCCEEECCHHHHCHHHCCCCCHHHCCHHHHCCHHHHHHHCCCCCEEEEE CGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSITDDLFISKHPGSQQRAADF ECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCHHHHHHH ANAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFIGVETGSYEQLRAYRKQILT HHHHHHCCCEEEEEEEEEECCEECHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH RGQDAADTINALQQLGIDVIPGTIMFHPTVQPDELRETVRLLRATKYTVGFKFMSRIVPY CCCCHHHHHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVVAKVAPDVGISFDEAEAYFLSR CCCCHHHHHCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LDEWENVIAGRIAEATS HHHHHHHHHHHHHHCCC >Mature Secondary Structure SIKAYAKTQGIAVTSVNGLVAGHGSVQETWLAMQSAAALSGTPRLVGFSCIDTFPEVLW CCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH LAQRARQAWDGVRIVIGNAMATLNYERILRQHDCFDYVVVGDGEVAFTKLALALANDAAV HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCC DDVPGLARRSEQGQILRTPSSLVDLDELPRPARDELPTVLADGFAASVFSTRGCPYRCTF CCCCCHHHCCCCCCEEECCHHHHCHHHCCCCCHHHCCHHHHCCHHHHHHHCCCCCEEEEE CGTGAMSAMLGKDSYRAKSVDAVVDEIDYLVSDYDVNFLSITDDLFISKHPGSQQRAADF ECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCHHHHHHH ANAVLRRGISVNFMVDIRLDSVVDLDLFKHLHRAGLRRVFIGVETGSYEQLRAYRKQILT HHHHHHCCCEEEEEEEEEECCEECHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH RGQDAADTINALQQLGIDVIPGTIMFHPTVQPDELRETVRLLRATKYTVGFKFMSRIVPY CCCCHHHHHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGTPLYQAYSDAGYLTAKWPLGQWEFVDPEASRVYADVVAKVAPDVGISFDEAEAYFLSR CCCCHHHHHCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LDEWENVIAGRIAEATS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]