Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE1 [H]
Identifier: 121636063
GI number: 121636063
Start: 207440
End: 209206
Strand: Reverse
Name: PE1 [H]
Synonym: BCG_0187c
Alternate gene names: 121636063
Gene position: 209206-207440 (Counterclockwise)
Preceding gene: 121636064
Following gene: 121636062
Centisome position: 4.78
GC content: 61.63
Gene sequence:
>1767_bases ATGGCCCCATTTGGGTTCACTCCAAAGGCCAGACACAACCGCGGAGTCGCTTTACGCTCAACGTATCGGCTCGACAGGTG GGTTATGGGCCCCGTCGACAAGGAGGGATGGGGTTTGTCGTACGTATTCGCGCAGCCGTCGGTATTGGCAGCGGCGGCTA CCGATTTGGCCGGGATCGGCTCGGCGATCAACCAGGCTACGGCGGCCGTCGCGGCCCCGACAACCGGCCTGGCGGCGGCT GCCGCGGACGAAGTGTCCACGGCCCTTGCCACGCTGTTCGGCGCGTACGGCCAGCAGTTCCAGGCGATCAGCGCACAGGT TGCGGCGTTTCACAACGAATTCACCCAGAGGTTGGCGGCGGCCGCAAACGCATTTGTCAATGCCGAGGCCACCAACACGA GCGCGCTGGTGCAGGAGGCGACGGCCGGACTCTTTAAGCCAACCTCACCCCCGGTGCTACCGCCAATGTTCAACCAAAAT ACGGCGATCATCATGGGCGGCACCGGGTCACCGATACCCACGCCGAGTTATGTCAACGCCATCACGACCTTGTTCATCGA CCCCGTCGTCTCGAATCCGGTCGTCAAAGCGCTGGTGACGCCCGAAGAGCTATATCCGATCACCGGCGTCAAATCCCTGC CCTTCCAAACCTCGGTGCAGTTGGGCCTACAGATTCTCGACGGCGCGATTTGGGAGCAAATCAACGCCGGAAACCACGTC ACCGTGTTCGGCTATTCGCAGAGCGCCGTCATCGCGTCCCTGGAAATGCAGCACCTCATCTCGCTGGGTCCCAACGCTCC CAGCCCCAGCCAGCTCAATTTCATCTTGATCGGCAACGAGATGAATCCCAATGGCGGGATACTTGCGCGCATACCCGGTC TGAATGTCACCACCCTCGGCCTACCGTTCTACGGGGCGACCCCGGACAATCCCTATCCGACGACGACCTACACCCTCGAG TACGACGGTTTCGCCGACTTCCCGCGGTATCCACTCAATGTCCTGTCCGATATCAACGCAGTATTCGGGATACTCACGGT GCACACCACGTATGCGGACCTCACACCGGCACAGATAGCGTCGGCCACGCAGTTGCCGACACAGGGCACGACGTCGAACA CGTACTACATCATTGAAACCGAGCATCTGCCGCTGCTGGCCCCGTTGCGGGCAATCCCGGTCATTGGCCCACCGCTGGCG GCGCTGGTCGAACCGAACTTGGAAGTAATCGTCAATCTGGGTTACGGCGACCCGAGGTTCGGCTATTCGACGAGCCCGGC GAACGTGCCTACCCCATTCGGGCTCTTCCCGGATGTCCCGGCGAGCGTTGTCGCCGATGCCCTGGTTGCCGGAACGCAAC AGGGCGTCAACGACTTCATGGTCGAGTTGCCAGCCGCCCTGAACACCCTGCCCCAAACTCCGATGCCCGCGTTCCCGCCG TATGTGCCGACGTTGCTACCGCCGCCACCGCCGCCACAACCGGCGACGCTCATCAACATCGCGGACACTTTCGCTTCCGT TGTGTCGACCGGCTACTCGATTCTTCTTCCGACGGCAGATCTAGGTCTTGCCTTCGTCACTATCCTGCCCGCCTATGACC TCACCCTGTTCGTGAATCAACTGGCGGCCGGCAACCTCCGCGCTGCGATCGAGCTGCCGCTCGCGGCCACCATTGGGTTG GCCGCCCTGGGCGGCATGATTGAATTCATCGCGATTGTGGTGACGTTGGCCGACATTACTCAGCAACTGCAAAGCTTCAG CATCTGA
Upstream 100 bases:
>100_bases ACACCGTTCGAAACATCGAGGGCCTCGTCACCTAACGGATTCCCGACGGCATCGACGTCCACCGACTACCGTTTACCGAC CTCGCCAATGACGAGGCAGC
Downstream 100 bases:
>100_bases TCGCCCGATGCTCGGGTCATTCAGCACTACTACGTGATCACCCCGGCCTGCCGCTGCTCGAGCCGCTGCCGGCCCTCGAT CATGAAGAGCCGGTTTTCGA
Product: PE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MAPFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAA AADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQN TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHV TVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLE YDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLA ALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPP YVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGL AALGGMIEFIAIVVTLADITQQLQSFSI
Sequences:
>Translated_588_residues MAPFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAA AADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQN TAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHV TVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLE YDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLA ALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPP YVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGL AALGGMIEFIAIVVTLADITQQLQSFSI >Mature_587_residues APFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAA ADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNT AIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVT VFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEY DGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAA LVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPY VPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLA ALGGMIEFIAIVVTLADITQQLQSFSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 61511; Mature: 61380
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIG CCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH SAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNA HHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH ITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHV HHHHHHCHHHCCCHHEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE TVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLG EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEECCCCCEEEEECCCCEEEEE LPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIA CEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCHHHHH SATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRF HHHCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCC GYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC YVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQ CCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH LAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APFGFTPKARHNRGVALRSTYRLDRWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIG CCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH SAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNA HHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH ITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHV HHHHHHCHHHCCCHHEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE TVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLG EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEECCCCCEEEEECCCCEEEEE LPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIA CEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCHHHHH SATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRF HHHCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCC GYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC YVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQ CCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH LAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]