Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is eriC [C]
Identifier: 121636055
GI number: 121636055
Start: 198601
End: 200079
Strand: Reverse
Name: eriC [C]
Synonym: BCG_0179c
Alternate gene names: 121636055
Gene position: 200079-198601 (Counterclockwise)
Preceding gene: 121636062
Following gene: 121636053
Centisome position: 4.57
GC content: 67.21
Gene sequence:
>1479_bases ATGGCGCCGGGCGACTGGTCGGTGTTCGCTTGGCATGCTGCTAACCTCCCGACCATGCCGGAGGCGGAAGACATCGGGAA CGAGGCCGCCGGCGGACGACTCGGCGTATCGATCAGGAGCGCGGGCTACCTGCGCAAATGGTTCCTGCTAGGCATCACGA TCGGTGTCATTGCCGGCCTGGGCGCCGTCGTCTTCTACCTCGCGCTGAAATACACCAGCGAGTTTCTGCTCGGCTACCTC GCGGACTATCAGATTCCCACTCCCGTTGGGGAGGGCGGCCACCGCGGGTCCACCGGTTTCGCGCGTCCGTGGGCGATTCC GCTGGTGACGACGGGCGGGGCGGTGCTGTCGGCATTGATCGTGGCCAAGCTCGCCCCGGAGGCCACCGGTCACGGCACCG ACGAAGCGATCGAGTCGGTGCACGGCGATCCGCGCGCCATCCGAGGTCGGGCGGTGCTGGTGAAGATGGTGGCCAGCGCC TTGACCATCGGCTCGGGCGGTTCAGGCGGCCGCGAAGGCCCGACCGCGCAGATCTCGGCCGGCTTCTGCTCACTGCTGAC CCGCCGGCTGAACCTGTCCAACGAAGACGGCCGGACCGCGGTAGCGCTGGGTATCGGCGCCGGCATCGGCGCCATCTTCG CTGCGCCACTGGGCGGAGCGGCGTTGGGCGCCTCGATCCCCTACCGCGACGACTTCGACTACCGCAACCTGCTGCCGGGT TTCATCGCCTCGGGAACCGCCTACGCCGTGCTCGGCGCCTTCTTGGGCTTCGACCCGCTGTTCGGCTACATCGACGCCGA GTATCGCTTCGAAAAGGCGTGGCCACTACTGTGGTTCGTGGTGATCGGGCTGATCGCAGCCGCCGTAGGCTACTTGTATG CCCGAGTCTTTCACGCGTCGGTGGCAATTACGCGCCGGCTGCCCGGGGGCCCGGTGCTCAAACCGGCGATCGGCGGACTG CTGGTCGGGCTGTTAGGTCTGCCGATTCCCCAGATCCTGAGCAGCGGCTATGGCTGGGCGCAGCTAGCCGCCGATCGGGG GACGCTGCTGAGCATCCCGTTGTGGATCGTCATCGTCTTGCCGATCGCCAAGATCCTCGCGACGTCGCTGTCGATCGGCA CCGGCGGATCAGGCGGGCTATTCGGGCCGGGAATCGTGATCGGCGCCTTCGTCGGAGCGGCGATCTGGCGGCTAGGCGAG CTCACCGAGCTGCCCGGGGTGCCCCACGAGCCGGGCATCTTCGTCGTGGTCGCAATGATGGCGTGCTTCGGCAGTGTCTC CCGCGCGCCGCTGGCCGTCATGATCATGGTCGCTGAGATGACCGGCTCGTTCTCGGTGGTGCCTGGAGCGATCATCGCCG TCGGTATCGCGGCACTGTTGTTGTCTCGCACCAACGTCACCATCTACGAGACGCAGCGACTGAACCGGCAGACCGCCGAG GCCGAACGCGGAGGCAGTGATCGGCCGACAACGGCTTAG
Upstream 100 bases:
>100_bases GTTTCGGATCTCCTCGCCGCACAGCGGCGGTGATCGCGTACGTCCAGACCTGGGCCATGGTTGCGCTGCTGATCGTCGGA TAGCGCTGGCCAACTCTGGG
Downstream 100 bases:
>100_bases CGGCGCCGGCAGCCGATCTGGCGGGAATCGGGGCGCCGGACCGAGCAAGATCCCCGTCAAACTCCCCTACAGCGCCCGGA TGTTCTGTACCGGCAGCCGG
Product: putative transmembrane protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYL ADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASA LTIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYRNLLPG FIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHASVAITRRLPGGPVLKPAIGGL LVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGE LTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAE AERGGSDRPTTA
Sequences:
>Translated_492_residues MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYL ADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASA LTIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYRNLLPG FIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHASVAITRRLPGGPVLKPAIGGL LVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGE LTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAE AERGGSDRPTTA >Mature_491_residues APGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYLA DYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASAL TIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYRNLLPGF IASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHASVAITRRLPGGPVLKPAIGGLL VGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGEL TELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAEA ERGGSDRPTTA
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=363, Percent_Identity=29.4765840220386, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87081943, Length=360, Percent_Identity=27.5, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 50775; Mature: 50644
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLRKWFLLGITIGVIAGL CCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH GAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHH VAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASALTIGSGGSGGREGPTAQISA HHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHH GFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYRNLLPG HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCH FIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHAS HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAITRRLPGGPVLKPAIGGLLVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVL HHHEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHH PIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGELTELPGVPHEPGIFVVVAMM HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAE HHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH AERGGSDRPTTA HHCCCCCCCCCC >Mature Secondary Structure APGDWSVFAWHAANLPTMPEAEDIGNEAAGGRLGVSIRSAGYLRKWFLLGITIGVIAGL CCCCCCEEEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH GAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHH VAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASALTIGSGGSGGREGPTAQISA HHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHH GFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYRNLLPG HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCH FIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHAS HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAITRRLPGGPVLKPAIGGLLVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVL HHHEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHH PIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGELTELPGVPHEPGIFVVVAMM HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAE HHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH AERGGSDRPTTA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]