Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121635958
Identifier: 121635958
GI number: 121635958
Start: 81478
End: 82347
Strand: Reverse
Name: 121635958
Synonym: BCG_0079c
Alternate gene names: NA
Gene position: 82347-81478 (Counterclockwise)
Preceding gene: 121635977
Following gene: 121635957
Centisome position: 1.88
GC content: 65.86
Gene sequence:
>870_bases GTGGCGAAGTGGCTGGGCGCACCCCTTGCGCGCGGAGTATCGACGGCAACCCGCGCCAAAGACAGCGACCGGCAGGACGC CTGCCGGATTCTCGACGACGCCCTGCGTGACGGCGAGCTCTCGATGGAGGAACACCGGGAGCGCGTCAGCGCAGCTACCA AGGCTGTGACCCTAGGTGACCTGCAGCGTCTGGTGGCCGACCTGCAGGTCGAGAGCGCACCCGCACAAATGCCCGCGCTC AAATCGCGGGCGAAACGCACCGAGTTGGGCTTGCTGGCCGCTGCGTTTGTCGCATCGGTGCTGCTGGGCGTCGGCATCGG CTGGGGCGTGTACGGCAACACCCGCTCTCCGCTGGACTTCACCTCGGATCCCGGAGCAAAGCCCGACGGGATCGCCCCCG TGGTGCTGACCCCGCCCAGGCAGCTGCATTCCCTCGGCGGGCTCACCGGCCTGCTGGAGCAGACCCGCAAGCGGTTCGGC GACACCATGGGCTACCGGCTGGTGATCTACCCGGAGTATGCGTCGCTCGATCGCGTCGACCCGGCGGACGACCGCCGAGT CCTGGCGTATACCTACCGCGGCGGCTGGGGCGATGCGACCAGTTCCGCCAAGAGCATTGCCGACGTGTCCGTGGTTGACC TGAGCAAATTCGATGCGAAGACCGCTGTGAGCATCATGCGCGGCGCCCCGGAAACCCTCGGCCTCAAACAATCCGACGTC AAAAGCATGTACCTGATCGTCGAACCGGCCAAGGACCCCACCACGCCGGCTGCGTTGTCGTTGTCGTTGTATGTCTCTAG CGACTACGGCGGTGGATACCTCGTTTTCGCAGGTGACGGCACCATCAAGCACGTCAGCTACCCGTCTTGA
Upstream 100 bases:
>100_bases ACGACGCCATCCACACCACCGATACGCAACCGGCGCCGTTGTTGCGCGGGTACGGCGGGATCGAGTTCAGATTCCCAGCC AGACTCCTACTATCGTCCCT
Downstream 100 bases:
>100_bases CGCGGTGATGTTGTCGCAAATATATCGAGGCGATACGATGACGCGAGGCGTCGAACCGTCGTAACGGCCATTCAAAAGCC ATACAAAAGGAGGTGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPAL KSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFG DTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVSIMRGAPETLGLKQSDV KSMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS
Sequences:
>Translated_289_residues MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPAL KSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFG DTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVSIMRGAPETLGLKQSDV KSMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS >Mature_288_residues AKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPALK SRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGD TMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVSIMRGAPETLGLKQSDVK SMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 30819; Mature: 30688
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGD CCCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVD CCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVSIMRGAPETLGLKQSDV CCCCCEEEEEEECCCCCCCHHHHHHHHCEEEEHHHHHHHHHHHHHHHCCCHHCCCCHHCC KSMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS CEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCC >Mature Secondary Structure AKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGD CCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVD CCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVSIMRGAPETLGLKQSDV CCCCCEEEEEEECCCCCCCHHHHHHHHCEEEEHHHHHHHHHHHHHHHCCCHHCCCCHHCC KSMYLIVEPAKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS CEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]