Click here to switch to the map view.

The map label for this gene is hcaT [C]

Identifier: 121610298

GI number: 121610298

Start: 3735224

End: 3736411

Strand: Direct

Name: hcaT [C]

Synonym: Veis_3362

Alternate gene names: 121610298

Gene position: 3735224-3736411 (Clockwise)

Preceding gene: 121610297

Following gene: 121610299

Centisome position: 67.1

GC content: 68.1

Gene sequence:

>1188_bases
ATGACAGCGCGCGCCAACGTGCCGCTGGCAGCGAGCTATGTCGGCTTCTTCCTGCCGGCCGGAGTGCTCCTCAGCTACTT
GCCGCCGTTTCTGGCGGGCAAGGGCCTGCAAGCGGCCGAAGTCGGACTGATCTTCAGCGCGGTCTTCGCGGTCAAGCTCG
TGATGGGACCGGCGCTGGCATGGTGGGCCGACCAGGCGCAGCGCCAGCAGTTGCTGCTTGCGCTGGTGGCCTGGGCCAGC
GTGGCCTGCGGCATTTTGCTGGCCATGTCGGAGCGCTTCGGCGTCGTGCTCGCAAGTGTCATCTGTATCGCGGTGTGCCG
CAACTACTTCCAGTGCATGCTCGAGGCGCTGGCCACGCGCGTGAAGAACGCCGGCGGCGCACCGCGCTACGGCTTGATGC
GCGGCATCGGCTCGGCGTCGGTCTGCCTGGGCGTCGTGCTGTACGGCGGCCTGTGGTCGGCTACTGCGGGCTACCAACAA
GTCGTGCTACCGCTGATGATCCTGGCTTCTGGGTTTGTGCTGATCGTGTGCCTGCGCGCGGTCGGCGCCGCGAGCGCAGC
GGCCGCAGCACCACCCGCCCCCGCCATTGCTGCGGACCCGGGGCGCGTGCGTGCCGTCTCGGCCCTTTTGCTGCTCGCAG
GTGCCACACTGCTTATCGGCGCTAACGGCGTGTTCTACAGCACGGCCACGCTGCTCATGGCGCAGCGTGGCGTGAGTCCC
GCCGGCATCGCGCTCCTGTGGTGCGCGGCCTTCGGCATCGAGGCGCTGGGCTTTGCGGCCTTCGACCGGCTGCGCGCATG
GTGTGGCACGGCATGGTTCTTCAGCGTGGCCGTTATGCTAGCTCTGGCGCGCTGGCTACTGTTTGCGCAAAGCGGCGAGC
TCGCATGGATGGCCGTGGCCTTCGCCTTGCACGTCGCGTCGTTCTCGTGGCTGCATGCGTTTTGCGCAAACTGGGTGCGC
GACGCCAGCCCCACGAAATTCGCCGTGACGGCGCAGGCGGTCTACACAGCCTGCGCGCACGGCATCGGCATCGCCGCAGC
CGCCTACGCTGCGAGCCTGCTGCTGCCCAGTCTGGGAAGCGGCGTCTACTGGATCGCCGCCGTGATGACGCTGGCCGGCG
CGCTTACGCTCGGCCTGCGCGCAGCGCTCGCTGCTGCGCCCGACGTGATGAATTTGAGGACATCATGA

Upstream 100 bases:

>100_bases
TAGTGGGGCCCAGCCGCAAGGTGTGGACCGGCCACCTGGACGATGTGATGAAGGATGCGGTGCGGCGCTGGAGCACCGCA
GAACTGTCGGCCTGGCTGCA

Downstream 100 bases:

>100_bases
GAAATCCGAACCACATCGCCGAGCTGCTCTCCGACAAGATCCAGCGCGCCTGCTCCAACGCACTTGCGGTCGCCATCGGC
GGTTCCCACTCGACTGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTARANVPLAASYVGFFLPAGVLLSYLPPFLAGKGLQAAEVGLIFSAVFAVKLVMGPALAWWADQAQRQQLLLALVAWAS
VACGILLAMSERFGVVLASVICIAVCRNYFQCMLEALATRVKNAGGAPRYGLMRGIGSASVCLGVVLYGGLWSATAGYQQ
VVLPLMILASGFVLIVCLRAVGAASAAAAAPPAPAIAADPGRVRAVSALLLLAGATLLIGANGVFYSTATLLMAQRGVSP
AGIALLWCAAFGIEALGFAAFDRLRAWCGTAWFFSVAVMLALARWLLFAQSGELAWMAVAFALHVASFSWLHAFCANWVR
DASPTKFAVTAQAVYTACAHGIGIAAAAYAASLLLPSLGSGVYWIAAVMTLAGALTLGLRAALAAAPDVMNLRTS

Sequences:

>Translated_395_residues
MTARANVPLAASYVGFFLPAGVLLSYLPPFLAGKGLQAAEVGLIFSAVFAVKLVMGPALAWWADQAQRQQLLLALVAWAS
VACGILLAMSERFGVVLASVICIAVCRNYFQCMLEALATRVKNAGGAPRYGLMRGIGSASVCLGVVLYGGLWSATAGYQQ
VVLPLMILASGFVLIVCLRAVGAASAAAAAPPAPAIAADPGRVRAVSALLLLAGATLLIGANGVFYSTATLLMAQRGVSP
AGIALLWCAAFGIEALGFAAFDRLRAWCGTAWFFSVAVMLALARWLLFAQSGELAWMAVAFALHVASFSWLHAFCANWVR
DASPTKFAVTAQAVYTACAHGIGIAAAAYAASLLLPSLGSGVYWIAAVMTLAGALTLGLRAALAAAPDVMNLRTS
>Mature_394_residues
TARANVPLAASYVGFFLPAGVLLSYLPPFLAGKGLQAAEVGLIFSAVFAVKLVMGPALAWWADQAQRQQLLLALVAWASV
ACGILLAMSERFGVVLASVICIAVCRNYFQCMLEALATRVKNAGGAPRYGLMRGIGSASVCLGVVLYGGLWSATAGYQQV
VLPLMILASGFVLIVCLRAVGAASAAAAAPPAPAIAADPGRVRAVSALLLLAGATLLIGANGVFYSTATLLMAQRGVSPA
GIALLWCAAFGIEALGFAAFDRLRAWCGTAWFFSVAVMLALARWLLFAQSGELAWMAVAFALHVASFSWLHAFCANWVRD
ASPTKFAVTAQAVYTACAHGIGIAAAAYAASLLLPSLGSGVYWIAAVMTLAGALTLGLRAALAAAPDVMNLRTS

Specific function: Probable Permease Involved In The Uptake Of 3- Phenylpropionic Acid. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40750; Mature: 40619

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARANVPLAASYVGFFLPAGVLLSYLPPFLAGKGLQAAEVGLIFSAVFAVKLVMGPALA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WWADQAQRQQLLLALVAWASVACGILLAMSERFGVVLASVICIAVCRNYFQCMLEALATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKNAGGAPRYGLMRGIGSASVCLGVVLYGGLWSATAGYQQVVLPLMILASGFVLIVCLRA
HHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VGAASAAAAAPPAPAIAADPGRVRAVSALLLLAGATLLIGANGVFYSTATLLMAQRGVSP
HCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHCCCCH
AGIALLWCAAFGIEALGFAAFDRLRAWCGTAWFFSVAVMLALARWLLFAQSGELAWMAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FALHVASFSWLHAFCANWVRDASPTKFAVTAQAVYTACAHGIGIAAAAYAASLLLPSLGS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVYWIAAVMTLAGALTLGLRAALAAAPDVMNLRTS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
>Mature Secondary Structure 
TARANVPLAASYVGFFLPAGVLLSYLPPFLAGKGLQAAEVGLIFSAVFAVKLVMGPALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WWADQAQRQQLLLALVAWASVACGILLAMSERFGVVLASVICIAVCRNYFQCMLEALATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKNAGGAPRYGLMRGIGSASVCLGVVLYGGLWSATAGYQQVVLPLMILASGFVLIVCLRA
HHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VGAASAAAAAPPAPAIAADPGRVRAVSALLLLAGATLLIGANGVFYSTATLLMAQRGVSP
HCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHCCCCH
AGIALLWCAAFGIEALGFAAFDRLRAWCGTAWFFSVAVMLALARWLLFAQSGELAWMAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FALHVASFSWLHAFCANWVRDASPTKFAVTAQAVYTACAHGIGIAAAAYAASLLLPSLGS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GVYWIAAVMTLAGALTLGLRAALAAAPDVMNLRTS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA