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The map label for this gene is parA [H]

Identifier: 121610292

GI number: 121610292

Start: 3729520

End: 3730425

Strand: Direct

Name: parA [H]

Synonym: Veis_3355

Alternate gene names: 121610292

Gene position: 3729520-3730425 (Clockwise)

Preceding gene: 121610287

Following gene: 121610293

Centisome position: 67.0

GC content: 69.43

Gene sequence:

>906_bases
ATGAGCAGGACGAAGCCAGCAGCCGCGCCGATGGTGGCGCGGGTCTATCTGCGCGTCAGCACCGACGCGCAAGACCTTGA
ACGCCAGGAAGGGATCATCACGGCCGCGAAGGCCGCCGGGTACTACGTCGCCGGCATCTACCGCGAGAAGGCCAGCGGCG
CACGCGCCGACCGGCCCGAGCTGCGGCGCATGGTGGCCGACCTGCAACCGGGCGAGGTGGTCATTGCCGAGAAGATCGAC
CGCATCAGCCGCCTACCCTTGCCCGAGGCCGAGCGTCTGGTGGCCTCGATCCGGGCCAAGGGTGCGCGCCTGGCTGTCCC
TGGCGTAGTCGATCTATCCGACCTGGCGGCCGAGGCCCAGGGCGTTGCCAAGATCGTCCTGGAGTCCGTCCAGGACATGC
TTTTGAAGCTGGCCCTACAGATGGCCCGCGACGACTACGAGGACAGGCGCGAGCGGCAGCGCCAGGGCATCGAGCTGGCG
AAGCGGGACGGCCGCTACAAGGGCCGGCGGGCTGATTCGAAGCTGCGCGCCCAGGTCATTGCGTTGCGCAGCATCGGCCA
GAGCATCGCGGAGACGGCCAAGCTGGCCGGGTGCAGCGTGGCCCAGGTCAAACGGATATGGGCCAGCCGCGACATGAGCC
AGGCCGAAGCGGCCAGGCATGGCGCTTTCGTGGAGGAAGCCTTGACCGAGGCCGACGCCGGCGCGGCGGCCGACGTGGAG
CAGGGCGCGGCCGAGCTGCCCGAGCCGGCTTTCCTTGATGATGAAGGCCCGGCCGCCGATCTGCCGATGCTCCCGTACCG
AACCCAAAACCTGCCGCAAATCCTGGCGGGCCTCACCGATGACGAACTGGCGACGTGGCCCGGCGACCTGGCCGACGCCG
AGCGGGCGCGGCGGCGAAAACTTTAG

Upstream 100 bases:

>100_bases
TTTAGGGAGGTTTTTGAGCTAGGCGCATATAAATCGAAATTTTATAAATGAGCCTGCTTGATTACGATAGGCGCATTCAG
GTATGTCCAAAGGAGCCAGC

Downstream 100 bases:

>100_bases
CAGCTAAAATATATCTAGCTTCTATATTATAATCGCTGCTACCTAGCAACTAGATAGGGGCTAAATTATGGCGGCGATTG
TCGCATTCGTCTCATAGAAG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPELRRMVADLQPGEVVIAEKID
RISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQGVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELA
KRDGRYKGRRADSKLRAQVIALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSQAEAARHGAFVEEALTEADAGAAADVE
QGAAELPEPAFLDDEGPAADLPMLPYRTQNLPQILAGLTDDELATWPGDLADAERARRRKL

Sequences:

>Translated_301_residues
MSRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPELRRMVADLQPGEVVIAEKID
RISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQGVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELA
KRDGRYKGRRADSKLRAQVIALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSQAEAARHGAFVEEALTEADAGAAADVE
QGAAELPEPAFLDDEGPAADLPMLPYRTQNLPQILAGLTDDELATWPGDLADAERARRRKL
>Mature_300_residues
SRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPELRRMVADLQPGEVVIAEKIDR
ISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQGVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELAK
RDGRYKGRRADSKLRAQVIALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSQAEAARHGAFVEEALTEADAGAAADVEQ
GAAELPEPAFLDDEGPAADLPMLPYRTQNLPQILAGLTDDELATWPGDLADAERARRRKL

Specific function: Involved in plasmid partition [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 32745; Mature: 32613

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPE
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHH
LRRMVADLQPGEVVIAEKIDRISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQ
HHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
GVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELAKRDGRYKGRRADSKLRAQVI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSQAEAARHGAFVEEALTEADAGAAADVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QGAAELPEPAFLDDEGPAADLPMLPYRTQNLPQILAGLTDDELATWPGDLADAERARRRK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHCC
L
C
>Mature Secondary Structure 
SRTKPAAAPMVARVYLRVSTDAQDLERQEGIITAAKAAGYYVAGIYREKASGARADRPE
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHH
LRRMVADLQPGEVVIAEKIDRISRLPLPEAERLVASIRAKGARLAVPGVVDLSDLAAEAQ
HHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
GVAKIVLESVQDMLLKLALQMARDDYEDRRERQRQGIELAKRDGRYKGRRADSKLRAQVI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALRSIGQSIAETAKLAGCSVAQVKRIWASRDMSQAEAARHGAFVEEALTEADAGAAADVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QGAAELPEPAFLDDEGPAADLPMLPYRTQNLPQILAGLTDDELATWPGDLADAERARRRK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2172207 [H]