Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610164
Identifier: 121610164
GI number: 121610164
Start: 3597309
End: 3597530
Strand: Direct
Name: 121610164
Synonym: Veis_3223
Alternate gene names: NA
Gene position: 3597309-3597530 (Clockwise)
Preceding gene: 121610162
Following gene: 121610165
Centisome position: 64.62
GC content: 69.37
Gene sequence:
>222_bases ATGATGGGCGCCCCACTTCAAGCCGTGCAGTATGTCGAGCCGTATGAGCGGATACCTGCGCTCTTTTCCGTCACTGTCCT GGGCGAGCGGCCGCACGGCAAGCGCATCGCGAGCGTGCTGCTGGCCACTGTCGGCGTGGTGGCCGTTGCCTGGACCGGCG CCGGCCCGGCGGCCCGTCGAACCCCCGGGGCTTGCCGGGCACAATACCGGCCACCATGCTGA
Upstream 100 bases:
>100_bases GGCGCCATGCCACGCCTACCATGTCGCTCGCTGGCGCCGCCATTGCGTTCGGAGACATCCGCACTGAAATGCAGGCCCGG GTCATCCGAGCGCCGTTGTC
Downstream 100 bases:
>100_bases TTTACCCCCCCATCGATCCCGTCGCGCTGCAGATCGGCCCGTTGGCCATTCACTGGTATGGCCTGAGCTATCTCGCGGCC TTTGGCCTGTTCATGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MMGAPLQAVQYVEPYERIPALFSVTVLGERPHGKRIASVLLATVGVVAVAWTGAGPAARRTPGACRAQYRPPC
Sequences:
>Translated_73_residues MMGAPLQAVQYVEPYERIPALFSVTVLGERPHGKRIASVLLATVGVVAVAWTGAGPAARRTPGACRAQYRPPC >Mature_73_residues MMGAPLQAVQYVEPYERIPALFSVTVLGERPHGKRIASVLLATVGVVAVAWTGAGPAARRTPGACRAQYRPPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7732; Mature: 7732
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGAPLQAVQYVEPYERIPALFSVTVLGERPHGKRIASVLLATVGVVAVAWTGAGPAARR CCCCCCHHHHHHCHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPGACRAQYRPPC CCCCCCCCCCCCC >Mature Secondary Structure MMGAPLQAVQYVEPYERIPALFSVTVLGERPHGKRIASVLLATVGVVAVAWTGAGPAARR CCCCCCHHHHHHCHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPGACRAQYRPPC CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA