| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610074
Identifier: 121610074
GI number: 121610074
Start: 3482574
End: 3483017
Strand: Direct
Name: 121610074
Synonym: Veis_3132
Alternate gene names: NA
Gene position: 3482574-3483017 (Clockwise)
Preceding gene: 121610073
Following gene: 121610075
Centisome position: 62.56
GC content: 59.46
Gene sequence:
>444_bases ATGGCCGACGACGCTCTCACACAATCCGATGCCGATACCTTGCTGCGCATGGAGAAGGTTCCTGCGTCGGCGGACACTTT CCACTTTCTCGGCTTCGGCGGGCGTATCGAGGTGCCGTTGGTATCGCGTGACGAGCGCGAGAAGTTCTCACTGGACATCA ACCGCAAGCGTATTGCGCTGACCACAGGCTATCAGACCCGTGCCCGGAAGGTTGTCGTGCTGGCGCGTCTTGATTTCGCC GCACCTCATCGCAATCCGGATGGCAGCGAAGTGGGCGTACCGCACTTGCATCTGTACCGCGAAGGCTACGGCGACAAGTG GGCGTTTGCGGTTCCCGATGGCATCCTGAGCAATCCGGCTGATGCGTGGCAAGTGCTGCACGATTTCATGAGGTACTGCG GCGTGGTTGAGAATCCGAATATCGTGCGAGGGCTGTTCGCATGA
Upstream 100 bases:
>100_bases GCAAATACGGTTATCCGCCGGATTTGCAGGATGCGGCGGTGCAGACCGTGCTGCAGCAGGCCGAGGCGCTCTCGGCTGGA TGGATTTAGGGGTTCCGCTC
Downstream 100 bases:
>100_bases GCACGACCGATGGTCTGATCAGCCGCTATTACGACTGGCTTAAGGCCAAGACCAACTGGCGGGAGATCAACGACTGGGTG GAAATCACCACGCCGTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MADDALTQSDADTLLRMEKVPASADTFHFLGFGGRIEVPLVSRDEREKFSLDINRKRIALTTGYQTRARKVVVLARLDFA APHRNPDGSEVGVPHLHLYREGYGDKWAFAVPDGILSNPADAWQVLHDFMRYCGVVENPNIVRGLFA
Sequences:
>Translated_147_residues MADDALTQSDADTLLRMEKVPASADTFHFLGFGGRIEVPLVSRDEREKFSLDINRKRIALTTGYQTRARKVVVLARLDFA APHRNPDGSEVGVPHLHLYREGYGDKWAFAVPDGILSNPADAWQVLHDFMRYCGVVENPNIVRGLFA >Mature_146_residues ADDALTQSDADTLLRMEKVPASADTFHFLGFGGRIEVPLVSRDEREKFSLDINRKRIALTTGYQTRARKVVVLARLDFAA PHRNPDGSEVGVPHLHLYREGYGDKWAFAVPDGILSNPADAWQVLHDFMRYCGVVENPNIVRGLFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16468; Mature: 16337
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDALTQSDADTLLRMEKVPASADTFHFLGFGGRIEVPLVSRDEREKFSLDINRKRIAL CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEECCCEEEEE TTGYQTRARKVVVLARLDFAAPHRNPDGSEVGVPHLHLYREGYGDKWAFAVPDGILSNPA ECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCH DAWQVLHDFMRYCGVVENPNIVRGLFA HHHHHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure ADDALTQSDADTLLRMEKVPASADTFHFLGFGGRIEVPLVSRDEREKFSLDINRKRIAL CCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEECCCEEEEE TTGYQTRARKVVVLARLDFAAPHRNPDGSEVGVPHLHLYREGYGDKWAFAVPDGILSNPA ECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCH DAWQVLHDFMRYCGVVENPNIVRGLFA HHHHHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA