| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610016
Identifier: 121610016
GI number: 121610016
Start: 3421936
End: 3422178
Strand: Direct
Name: 121610016
Synonym: Veis_3072
Alternate gene names: NA
Gene position: 3421936-3422178 (Clockwise)
Preceding gene: 121610014
Following gene: 121610031
Centisome position: 61.47
GC content: 53.91
Gene sequence:
>243_bases GTGTTGATCTTCAGCGTTGTTGTGGATGATAACGATTCTCAACTGCAAGTCAAGCAAGTTGCGCAATCTTTTTGTTTGAC CGACAGGGTGTCCGCGTTCGTTGAAGCAGGGTGGTCGGCAGGAGAGCATCCATTGCCAGATGGCTTTGTGCAACGCTGTC CGGCAGGCAAGGCCGGCCGGGCAGGGGGTCAGGCAAAGAATTTCGAATTTGCTTCTTGCGGCATCAGGGCTTCATACGGG TGA
Upstream 100 bases:
>100_bases TAGTGGACGCCCGCGTCGGTGCCCAGAGAAGCCGCCGGCTCGGCGGGGGCGCAAAGCACGGGCGAGGCGCAGGTCATGGA GGCTGGCATGGTGTTGTCCT
Downstream 100 bases:
>100_bases TGGCTAGACCATACCGATCATCATGCGGCTTGGCTCGGTAGAGTTTGAAAGCAGGTTTGCCCAACGCAACCCGTTTGGCA AGAAGTTCTGAGACGATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MLIFSVVVDDNDSQLQVKQVAQSFCLTDRVSAFVEAGWSAGEHPLPDGFVQRCPAGKAGRAGGQAKNFEFASCGIRASYG
Sequences:
>Translated_80_residues MLIFSVVVDDNDSQLQVKQVAQSFCLTDRVSAFVEAGWSAGEHPLPDGFVQRCPAGKAGRAGGQAKNFEFASCGIRASYG >Mature_80_residues MLIFSVVVDDNDSQLQVKQVAQSFCLTDRVSAFVEAGWSAGEHPLPDGFVQRCPAGKAGRAGGQAKNFEFASCGIRASYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8496; Mature: 8496
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFSVVVDDNDSQLQVKQVAQSFCLTDRVSAFVEAGWSAGEHPLPDGFVQRCPAGKAGR CEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCC AGGQAKNFEFASCGIRASYG CCCCCCCCEECCCCEEECCC >Mature Secondary Structure MLIFSVVVDDNDSQLQVKQVAQSFCLTDRVSAFVEAGWSAGEHPLPDGFVQRCPAGKAGR CEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCC AGGQAKNFEFASCGIRASYG CCCCCCCCEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA