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The map label for this gene is nodI [H]

Identifier: 121609987

GI number: 121609987

Start: 3396711

End: 3397655

Strand: Direct

Name: nodI [H]

Synonym: Veis_3043

Alternate gene names: 121609987

Gene position: 3396711-3397655 (Clockwise)

Preceding gene: 121609986

Following gene: 121609988

Centisome position: 61.02

GC content: 67.94

Gene sequence:

>945_bases
ATGAAGACCGCTGAGACCTGCGATGGAGCGATGTCTCCCCAGATCACACCTGCCACCCCCATGCTGCTGCAACTCGCCGA
CCTCGTCTTCGAGCGTACCGACGGCTTCACGCTCTGCGTGCCCGAACTCCACCTCGCATGCGACGAAGTGCTGGGCGTGA
TCGGCCCCAATGGCAGCGGTAAGACCTCCCTGCTCTCCTGCCTACTCGGGACCGCGCAGGCGGGCCACGGGCGGGTCGCC
CTGCTGGGCGATCCCGCCGGCCGGCTGGCCCTGGCCACGCGGCAGCACTTCGGCCTGCAAATGCAGGGCGCCGGCTACAA
CGAACTTTACCTCGTGCGGGACATCCAGCGCCTGCACGGCCTCATTTACGGCCGGTCGGATGCCGCCGTGTTCGATGCGT
TCGGCGTGCCCGCCCTGGGCGCTAAGCGTTTCGGCCGGCTGTCGTCGGGCGAACAGCAGCGTGTGCAACTGGCCATGGCC
CTCGCGCACCATCCGCGGCTCGCGGTGTTCGACGAACCCACGTCCAACCTGGATCCGGCCTACGAGGAAGCCTTCTGCGG
CATAGTGCGCACTCGTCGCGCAGCGGGAGATTTCGGCGCCCTGGTGATCACGCATTCGCCCCGCGTCGTGACGCTGTGCG
ATCGCTTGATGATCCTCGACGCGGGCAAGGTCGATGCGCTCGGCGCTCCGTCCGAACTGGTGAAGGCGCGCTTCGACCTG
GTGGGCTGCCGCATCGTCGCACCCGCACCGGCGCGTGCGGAAGCGCTAGCGGCGCTGCGCGCCACCGCCAGGCGCGTGAT
CGAAAACGACCGCAGCCTCGTGCTGTACGGAGGCGCGGACCTGCGGCAGGCGGCCTTCGTCCACTTGCAAAGCCACGGTG
TGGACAGTTGCACCCTCTGGACGCCCGATGCAACCGATCTGCTGGAAGGAATCGGCCATGGCTGA

Upstream 100 bases:

>100_bases
ATGCCGACCACCACGACCGCCGCATCGCGAACGAAGTCCTCGAGAGCCTGTTCTATTTTTCCAAGCGCAGTGCCGAAGCT
GCCAGATCCGAGGAGGACCG

Downstream 100 bases:

>100_bases
AGCCGCAACCCTGCCGCGCAACGGCGGCGCGGCGGCACTGCTCGTGCTGCACGTCGCGCGCATCGAACTGGCCGCCTTTC
TGCGCCATCCGCTGTCGATC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKTAETCDGAMSPQITPATPMLLQLADLVFERTDGFTLCVPELHLACDEVLGVIGPNGSGKTSLLSCLLGTAQAGHGRVA
LLGDPAGRLALATRQHFGLQMQGAGYNELYLVRDIQRLHGLIYGRSDAAVFDAFGVPALGAKRFGRLSSGEQQRVQLAMA
LAHHPRLAVFDEPTSNLDPAYEEAFCGIVRTRRAAGDFGALVITHSPRVVTLCDRLMILDAGKVDALGAPSELVKARFDL
VGCRIVAPAPARAEALAALRATARRVIENDRSLVLYGGADLRQAAFVHLQSHGVDSCTLWTPDATDLLEGIGHG

Sequences:

>Translated_314_residues
MKTAETCDGAMSPQITPATPMLLQLADLVFERTDGFTLCVPELHLACDEVLGVIGPNGSGKTSLLSCLLGTAQAGHGRVA
LLGDPAGRLALATRQHFGLQMQGAGYNELYLVRDIQRLHGLIYGRSDAAVFDAFGVPALGAKRFGRLSSGEQQRVQLAMA
LAHHPRLAVFDEPTSNLDPAYEEAFCGIVRTRRAAGDFGALVITHSPRVVTLCDRLMILDAGKVDALGAPSELVKARFDL
VGCRIVAPAPARAEALAALRATARRVIENDRSLVLYGGADLRQAAFVHLQSHGVDSCTLWTPDATDLLEGIGHG
>Mature_314_residues
MKTAETCDGAMSPQITPATPMLLQLADLVFERTDGFTLCVPELHLACDEVLGVIGPNGSGKTSLLSCLLGTAQAGHGRVA
LLGDPAGRLALATRQHFGLQMQGAGYNELYLVRDIQRLHGLIYGRSDAAVFDAFGVPALGAKRFGRLSSGEQQRVQLAMA
LAHHPRLAVFDEPTSNLDPAYEEAFCGIVRTRRAAGDFGALVITHSPRVVTLCDRLMILDAGKVDALGAPSELVKARFDL
VGCRIVAPAPARAEALAALRATARRVIENDRSLVLYGGADLRQAAFVHLQSHGVDSCTLWTPDATDLLEGIGHG

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI150417984, Length=248, Percent_Identity=27.8225806451613, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=203, Percent_Identity=30.5418719211823, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI87081782, Length=235, Percent_Identity=26.8085106382979, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789891, Length=201, Percent_Identity=31.3432835820896, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787029, Length=212, Percent_Identity=28.7735849056604, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790739, Length=206, Percent_Identity=29.6116504854369, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=24.8803827751196, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788472, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=208, Percent_Identity=24.0384615384615, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788225, Length=215, Percent_Identity=31.1627906976744, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=27.7511961722488, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789864, Length=217, Percent_Identity=25.3456221198157, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786703, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786803, Length=218, Percent_Identity=27.9816513761468, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787370, Length=208, Percent_Identity=24.5192307692308, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786319, Length=190, Percent_Identity=24.7368421052632, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87082268, Length=192, Percent_Identity=28.125, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=203, Percent_Identity=26.6009852216749, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786345, Length=220, Percent_Identity=29.0909090909091, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=224, Percent_Identity=25.4464285714286, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=217, Percent_Identity=26.2672811059908, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=217, Percent_Identity=26.2672811059908, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=217, Percent_Identity=26.2672811059908, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582014, Length=165, Percent_Identity=28.4848484848485, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582012, Length=165, Percent_Identity=28.4848484848485, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650853, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45552437, Length=219, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24650855, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24585557, Length=219, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI281362751, Length=210, Percent_Identity=25.2380952380952, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85725262, Length=215, Percent_Identity=27.4418604651163, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33355; Mature: 33355

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAETCDGAMSPQITPATPMLLQLADLVFERTDGFTLCVPELHLACDEVLGVIGPNGSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCC
KTSLLSCLLGTAQAGHGRVALLGDPAGRLALATRQHFGLQMQGAGYNELYLVRDIQRLHG
HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEHHHCCEEECCCCCCEEHHHHHHHHHHH
LIYGRSDAAVFDAFGVPALGAKRFGRLSSGEQQRVQLAMALAHHPRLAVFDEPTSNLDPA
HEECCCCCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
YEEAFCGIVRTRRAAGDFGALVITHSPRVVTLCDRLMILDAGKVDALGAPSELVKARFDL
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHEHHEEECCCCCCCCCCHHHHHHHHHH
VGCRIVAPAPARAEALAALRATARRVIENDRSLVLYGGADLRQAAFVHLQSHGVDSCTLW
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE
TPDATDLLEGIGHG
CCCHHHHHHHCCCC
>Mature Secondary Structure
MKTAETCDGAMSPQITPATPMLLQLADLVFERTDGFTLCVPELHLACDEVLGVIGPNGSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCC
KTSLLSCLLGTAQAGHGRVALLGDPAGRLALATRQHFGLQMQGAGYNELYLVRDIQRLHG
HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEHHHCCEEECCCCCCEEHHHHHHHHHHH
LIYGRSDAAVFDAFGVPALGAKRFGRLSSGEQQRVQLAMALAHHPRLAVFDEPTSNLDPA
HEECCCCCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
YEEAFCGIVRTRRAAGDFGALVITHSPRVVTLCDRLMILDAGKVDALGAPSELVKARFDL
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHEHHEEECCCCCCCCCCHHHHHHHHHH
VGCRIVAPAPARAEALAALRATARRVIENDRSLVLYGGADLRQAAFVHLQSHGVDSCTLW
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE
TPDATDLLEGIGHG
CCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755627 [H]