| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609956
Identifier: 121609956
GI number: 121609956
Start: 3359943
End: 3360938
Strand: Direct
Name: 121609956
Synonym: Veis_3012
Alternate gene names: NA
Gene position: 3359943-3360938 (Clockwise)
Preceding gene: 121609955
Following gene: 121609957
Centisome position: 60.36
GC content: 49.8
Gene sequence:
>996_bases ATGACAGAGTTAAACCAATTCCTGCTCTATACCGCGCCAGACGGGGCGGTAAAGGTAGATGTGTTCTTCAAGGGCGAAAC AGCCTGGTTAACGCAAAAAGCACTGGCCGAATTGTTCGGCGTCCAAGTGCCAGCGATCAACAAACACCTGAAAAATATCT TCGATACCAAAGAACTGGTAGAGGCTTCAGTTATTTCCATTTTGGAAACCACTGCCGCCGATGGGAAAAACTATCAGACC CGCTACTACAACCTCGATGCCATCATCGCCGTTGGCTACAGAGTAAACAGTTATCAGGCGACCCAATTCCGCATCTGGGC GACAACCACGCTGCGTGAATTCATCACAAAGGGTTTTGTGCTGGATGATGAGCGCCTAAAGCGAGGCAAGCAAACCTTCG GCAAAGATTACTTTGACGAGTTACTGGAGCGCATCCGTGAGATTCGGGCCAGTGAGCGGCGCTTTTATCAAAAAATCACC GACATCTACGCCCTGTCCATGGACTACAGCGTCGATGCGCCTTTAGCGCGCGAATTTTTCTCCAGTGTGCAAAACAAGCT GCATTGGGCGATTACCGGTAAAACGGCTGCCGAACTGATCTACACATCTGCCGATGCGACCAAGATTTACATGGGCTTGG CGACATGGAAGCACGCACCAGACGGCAAGATATTGAAATCCGATGTGGCGGTCGCCAAAAACTATCTGAGTGAAGCACAC GTCAAGGAACTGAACCGCATCGTTTCCGCTTACCTTGATTTGGCTGAGAACCGTGCCGAGCGCGGCATCCTTATGAAAAT GGCCGACTGGACAGGCTTTCTGCATAGTTTTCTGGAACTGTCGAATTATCCAATTTTGCAAGACAAAGGCAAGGTCAGTG CATTGGAGGCGAAGCTCAAAGCGGAAAGTGAGTTCGATGTTTATCGGCAGCGGCAGGATGTGGAATACCTCTCGGACTTT GACCGGGAAATCAAACGGTTGGAGGGAAAAAAATAA
Upstream 100 bases:
>100_bases GAAGCGCGACTGGGCTTGGCGTTCGCCATGCGAAGTTGGCGGTCGGAGCTGCAGCTACGCTGACTGTCTTTCTGTTCGAG ACTCACAAAGAGACAAAGCC
Downstream 100 bases:
>100_bases TGGCTTTTTTATCTGAAGCCGCTATTGAGCTGGCACTGCTAGAGCAATTGCGGGGGCTGGGCTACCGCATCGAGCAGGAA AAAGATATCGGCCCCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTELNQFLLYTAPDGAVKVDVFFKGETAWLTQKALAELFGVQVPAINKHLKNIFDTKELVEASVISILETTAADGKNYQT RYYNLDAIIAVGYRVNSYQATQFRIWATTTLREFITKGFVLDDERLKRGKQTFGKDYFDELLERIREIRASERRFYQKIT DIYALSMDYSVDAPLAREFFSSVQNKLHWAITGKTAAELIYTSADATKIYMGLATWKHAPDGKILKSDVAVAKNYLSEAH VKELNRIVSAYLDLAENRAERGILMKMADWTGFLHSFLELSNYPILQDKGKVSALEAKLKAESEFDVYRQRQDVEYLSDF DREIKRLEGKK
Sequences:
>Translated_331_residues MTELNQFLLYTAPDGAVKVDVFFKGETAWLTQKALAELFGVQVPAINKHLKNIFDTKELVEASVISILETTAADGKNYQT RYYNLDAIIAVGYRVNSYQATQFRIWATTTLREFITKGFVLDDERLKRGKQTFGKDYFDELLERIREIRASERRFYQKIT DIYALSMDYSVDAPLAREFFSSVQNKLHWAITGKTAAELIYTSADATKIYMGLATWKHAPDGKILKSDVAVAKNYLSEAH VKELNRIVSAYLDLAENRAERGILMKMADWTGFLHSFLELSNYPILQDKGKVSALEAKLKAESEFDVYRQRQDVEYLSDF DREIKRLEGKK >Mature_330_residues TELNQFLLYTAPDGAVKVDVFFKGETAWLTQKALAELFGVQVPAINKHLKNIFDTKELVEASVISILETTAADGKNYQTR YYNLDAIIAVGYRVNSYQATQFRIWATTTLREFITKGFVLDDERLKRGKQTFGKDYFDELLERIREIRASERRFYQKITD IYALSMDYSVDAPLAREFFSSVQNKLHWAITGKTAAELIYTSADATKIYMGLATWKHAPDGKILKSDVAVAKNYLSEAHV KELNRIVSAYLDLAENRAERGILMKMADWTGFLHSFLELSNYPILQDKGKVSALEAKLKAESEFDVYRQRQDVEYLSDFD REIKRLEGKK
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38032; Mature: 37901
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELNQFLLYTAPDGAVKVDVFFKGETAWLTQKALAELFGVQVPAINKHLKNIFDTKELV CCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EASVISILETTAADGKNYQTRYYNLDAIIAVGYRVNSYQATQFRIWATTTLREFITKGFV HHHHHHHHHHHCCCCCCCCEEEEECEEEEEEEEEECCEECEEEEEEEHHHHHHHHHCCCC LDDERLKRGKQTFGKDYFDELLERIREIRASERRFYQKITDIYALSMDYSVDAPLAREFF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH SSVQNKLHWAITGKTAAELIYTSADATKIYMGLATWKHAPDGKILKSDVAVAKNYLSEAH HHHHHCEEEEEECCHHHHHEEECCCHHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VKELNRIVSAYLDLAENRAERGILMKMADWTGFLHSFLELSNYPILQDKGKVSALEAKLK HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AESEFDVYRQRQDVEYLSDFDREIKRLEGKK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TELNQFLLYTAPDGAVKVDVFFKGETAWLTQKALAELFGVQVPAINKHLKNIFDTKELV CCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EASVISILETTAADGKNYQTRYYNLDAIIAVGYRVNSYQATQFRIWATTTLREFITKGFV HHHHHHHHHHHCCCCCCCCEEEEECEEEEEEEEEECCEECEEEEEEEHHHHHHHHHCCCC LDDERLKRGKQTFGKDYFDELLERIREIRASERRFYQKITDIYALSMDYSVDAPLAREFF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH SSVQNKLHWAITGKTAAELIYTSADATKIYMGLATWKHAPDGKILKSDVAVAKNYLSEAH HHHHHCEEEEEECCHHHHHEEECCCHHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VKELNRIVSAYLDLAENRAERGILMKMADWTGFLHSFLELSNYPILQDKGKVSALEAKLK HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AESEFDVYRQRQDVEYLSDFDREIKRLEGKK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA