| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609921
Identifier: 121609921
GI number: 121609921
Start: 3324216
End: 3325016
Strand: Direct
Name: 121609921
Synonym: Veis_2976
Alternate gene names: NA
Gene position: 3324216-3325016 (Clockwise)
Preceding gene: 121609920
Following gene: 121609928
Centisome position: 59.72
GC content: 66.29
Gene sequence:
>801_bases ATGACCCCTGTGCACGAGGTGTACGCCATCAAGTACGCCGAGCACGATCGCAATGCATCGGCAAACTTCATCGGTGGCGA TGCGCACGACGGCCCGATGCCGATGGATTACTTTGTCTGGCTGATCCGCGGGCCCTCCGGCGTGTGGGCCATCGATACCG GCTTCAACCAGGAGGCCGCGACCGCACGCGGCCGCAGGCTCTTGCGGAACCCGGCCACTGCGCTGGGGCTGATCGGCGAG TCGGCGGCCGACATACGCAACGTCATCGTCACGCACCTGCACTACGACCATGCGGGCAACTGCGAGCTGTTTCCTGCCGC AACCTTCCACTTGCAAGACCGCGAGATGCAGTTCGCGACCGGCCGCTACATGGCGCACCAGTGCATGCATGCGGCCTACG ACGTGTTCGACGTGCTGCGCATGGTCGGCAGCGTTTACGCAGGCCGGGTGCGCTTCCACGACGGCCAAGAGACGCTGGCG CCCGGCATTTCCGTGCACCTGATCGGCGGCCACACGATGGGCCTGCAAGCGGTGCGCGTGCACACGCGGCGCGGCTGGGT GGTGCTCGCATCCGACGCCAGCCACTATTACCGGAACATCGGGGAAGGCAAGCCTTTTCCCATCGTCCACGACATGGGCG ACATGGTCGAAGGCTGGCAGCGGATCCGGGGGCTGGCAGAGTCGCCGGCGCATGTGATTCCGGGGCACGACCCGCAGGTG CTGCTGCGCTACCCGCCACCGGGCACCGGGCTTTCCGGCATCGTTGCCGCGTTGCATGAAGACGAGCAGCAGGTGCGCTG A
Upstream 100 bases:
>100_bases ATCGGCAAGTGGACGCAGATCATCGAGGAAAAGGGCTTGCAGATACAGTGAATGGAAAATTCGCGGTCGCGTCGCCGACC AGCAAAGAAGGAGACAAAAG
Downstream 100 bases:
>100_bases GGCTGCCTTTCGCCTATTGCTCCCGGGGTCGGCCGAAGCGTTAGCTGGCCGCAGGCGCGGCCAGCGCCCGCATCCTGGAG ACATCGGCGCACCCATCGAG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Class B
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTPVHEVYAIKYAEHDRNASANFIGGDAHDGPMPMDYFVWLIRGPSGVWAIDTGFNQEAATARGRRLLRNPATALGLIGE SAADIRNVIVTHLHYDHAGNCELFPAATFHLQDREMQFATGRYMAHQCMHAAYDVFDVLRMVGSVYAGRVRFHDGQETLA PGISVHLIGGHTMGLQAVRVHTRRGWVVLASDASHYYRNIGEGKPFPIVHDMGDMVEGWQRIRGLAESPAHVIPGHDPQV LLRYPPPGTGLSGIVAALHEDEQQVR
Sequences:
>Translated_266_residues MTPVHEVYAIKYAEHDRNASANFIGGDAHDGPMPMDYFVWLIRGPSGVWAIDTGFNQEAATARGRRLLRNPATALGLIGE SAADIRNVIVTHLHYDHAGNCELFPAATFHLQDREMQFATGRYMAHQCMHAAYDVFDVLRMVGSVYAGRVRFHDGQETLA PGISVHLIGGHTMGLQAVRVHTRRGWVVLASDASHYYRNIGEGKPFPIVHDMGDMVEGWQRIRGLAESPAHVIPGHDPQV LLRYPPPGTGLSGIVAALHEDEQQVR >Mature_265_residues TPVHEVYAIKYAEHDRNASANFIGGDAHDGPMPMDYFVWLIRGPSGVWAIDTGFNQEAATARGRRLLRNPATALGLIGES AADIRNVIVTHLHYDHAGNCELFPAATFHLQDREMQFATGRYMAHQCMHAAYDVFDVLRMVGSVYAGRVRFHDGQETLAP GISVHLIGGHTMGLQAVRVHTRRGWVVLASDASHYYRNIGEGKPFPIVHDMGDMVEGWQRIRGLAESPAHVIPGHDPQVL LRYPPPGTGLSGIVAALHEDEQQVR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29371; Mature: 29239
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVHEVYAIKYAEHDRNASANFIGGDAHDGPMPMDYFVWLIRGPSGVWAIDTGFNQEAA CCCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCEEEEECCCCCHHH TARGRRLLRNPATALGLIGESAADIRNVIVTHLHYDHAGNCELFPAATFHLQDREMQFAT HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEECEEEEECCCCHHHHH GRYMAHQCMHAAYDVFDVLRMVGSVYAGRVRFHDGQETLAPGISVHLIGGHTMGLQAVRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCEEEEECCCCCCEEEEEE HTRRGWVVLASDASHYYRNIGEGKPFPIVHDMGDMVEGWQRIRGLAESPAHVIPGHDPQV EECCCEEEEECCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LLRYPPPGTGLSGIVAALHEDEQQVR EEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TPVHEVYAIKYAEHDRNASANFIGGDAHDGPMPMDYFVWLIRGPSGVWAIDTGFNQEAA CCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCEEEEECCCCCHHH TARGRRLLRNPATALGLIGESAADIRNVIVTHLHYDHAGNCELFPAATFHLQDREMQFAT HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEECEEEEECCCCHHHHH GRYMAHQCMHAAYDVFDVLRMVGSVYAGRVRFHDGQETLAPGISVHLIGGHTMGLQAVRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCEEEEECCCCCCEEEEEE HTRRGWVVLASDASHYYRNIGEGKPFPIVHDMGDMVEGWQRIRGLAESPAHVIPGHDPQV EECCCEEEEECCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LLRYPPPGTGLSGIVAALHEDEQQVR EEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA