| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is phnI [H]
Identifier: 121609905
GI number: 121609905
Start: 3310380
End: 3311486
Strand: Direct
Name: phnI [H]
Synonym: Veis_2959
Alternate gene names: 121609905
Gene position: 3310380-3311486 (Clockwise)
Preceding gene: 121609904
Following gene: 121609906
Centisome position: 59.47
GC content: 68.38
Gene sequence:
>1107_bases ATGTACGTTGCCGTCAAGGGCGGAGAAGCCGCCATCCGCAGCAGTTACCGGCGGCTGGCCGAGCAGCGCCGGGGCGATGC CGCGCAGCCGCCACTGTCGGTGTCACAGATCCGTGGGCAGCTCAAGCTGGCCGTGGACCGCGTGATGACCGAGGGTTCGG TGTACGACCCCGAACTGGCCGCGCTGGCGATCAAGCAGGCTGCCGGGGATCTGGTCGAAGCCATCTTCCTGCTGCGCGCC TACCGCGCCACGCTGCCGCGCCTGGGCAGCAGTTGCCCTGTCGATACCGCCCGCATGCTGCTGGACCGGCGCATCTCGGC CACCTTCAAAGACCTGCCCGGCGGCCAACTGCTGGGCCCCACTTACGACTACACGCAGCGCCTGCTGGACTTCACGCTGC TGGCGCAGAGCCAGGAGCCGTTGGCCGACCCGGTGGCGGACTGGGCGCCCGAGGCCCCCGGGCTGACACCTCCCCCGGCG CGCGTGGTGGAGCTGCTCAACCAGGAAGGGCTGATCGAAACCCGGCCCGTCCCCCCGGGCGACCCCGGCGCCACCGACCT GACGCGCGAGCCGCTGCGCTTTCCGGCAGACCGCGCCACGCGCTTGCAAAACCTGGCCCGTGGCGACGAGGGCTTTTTGC TGGCGATGGCCTATTCCACCCAGCGCGGTTATGCGCACTCGCACCCGTTCGTCGCCGAACTGCGCCTGGGCACGGTGGCG CTGGAGATTGCGCCCGAGGAACTGGGCTTTGTGATCTCCATCGGCGACATCGAGATCACCGAATGCGAGATGGTGAACCA GTTTGCCGGCAGCCAGAGTGAGCCGCCGCAGTTCACGCGCGGCTATGGCCTGGCCTTTGGCCACAGCGAGCGCAAGGCCC TGGCGATGAGCCTGGTGGACCGCGCGCTGCGCGCCGATGAACTGGGCGAGACGGTGCAATCGCCCGCGCAGATGCAGGAG TTCGTGCTGTCCCATAGCGACAGTCTGGAGGCGTCGGGCTTCGTGCAGCACCTGAAGCTGCCGCATTACGTGGACTTTCA GGCCGAGTTGGAACTGGTGCGCAAGATGCGCGCAGCGGCCCGATCCCCTGCCGGAGATGACAGATGA
Upstream 100 bases:
>100_bases GGGTCGATCTGCTGCTGGGTGGGGCGGCGCATATCGTGGGCCTGCCGCGCACCACGCGCATCGTCCGCACACCACACGAC ACCACCGAGGAGATCTGAGC
Downstream 100 bases:
>100_bases ACACGCTGCCCTTGGCGACCGATGCACAGCCTGATGCACGGCTTGATGCACAGCCTGATGCACCATCCGTCGATGGCGGC TTCAACTTCGCCTATCTCGA
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MYVAVKGGEAAIRSSYRRLAEQRRGDAAQPPLSVSQIRGQLKLAVDRVMTEGSVYDPELAALAIKQAAGDLVEAIFLLRA YRATLPRLGSSCPVDTARMLLDRRISATFKDLPGGQLLGPTYDYTQRLLDFTLLAQSQEPLADPVADWAPEAPGLTPPPA RVVELLNQEGLIETRPVPPGDPGATDLTREPLRFPADRATRLQNLARGDEGFLLAMAYSTQRGYAHSHPFVAELRLGTVA LEIAPEELGFVISIGDIEITECEMVNQFAGSQSEPPQFTRGYGLAFGHSERKALAMSLVDRALRADELGETVQSPAQMQE FVLSHSDSLEASGFVQHLKLPHYVDFQAELELVRKMRAAARSPAGDDR
Sequences:
>Translated_368_residues MYVAVKGGEAAIRSSYRRLAEQRRGDAAQPPLSVSQIRGQLKLAVDRVMTEGSVYDPELAALAIKQAAGDLVEAIFLLRA YRATLPRLGSSCPVDTARMLLDRRISATFKDLPGGQLLGPTYDYTQRLLDFTLLAQSQEPLADPVADWAPEAPGLTPPPA RVVELLNQEGLIETRPVPPGDPGATDLTREPLRFPADRATRLQNLARGDEGFLLAMAYSTQRGYAHSHPFVAELRLGTVA LEIAPEELGFVISIGDIEITECEMVNQFAGSQSEPPQFTRGYGLAFGHSERKALAMSLVDRALRADELGETVQSPAQMQE FVLSHSDSLEASGFVQHLKLPHYVDFQAELELVRKMRAAARSPAGDDR >Mature_368_residues MYVAVKGGEAAIRSSYRRLAEQRRGDAAQPPLSVSQIRGQLKLAVDRVMTEGSVYDPELAALAIKQAAGDLVEAIFLLRA YRATLPRLGSSCPVDTARMLLDRRISATFKDLPGGQLLGPTYDYTQRLLDFTLLAQSQEPLADPVADWAPEAPGLTPPPA RVVELLNQEGLIETRPVPPGDPGATDLTREPLRFPADRATRLQNLARGDEGFLLAMAYSTQRGYAHSHPFVAELRLGTVA LEIAPEELGFVISIGDIEITECEMVNQFAGSQSEPPQFTRGYGLAFGHSERKALAMSLVDRALRADELGETVQSPAQMQE FVLSHSDSLEASGFVQHLKLPHYVDFQAELELVRKMRAAARSPAGDDR
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=359, Percent_Identity=59.3314763231198, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 40188; Mature: 40188
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEAAIRSSYRRLAEQRRGDAAQPPLSVSQIRGQLKLAVDRVMTEGSVYDPELA CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ALAIKQAAGDLVEAIFLLRAYRATLPRLGSSCPVDTARMLLDRRISATFKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFTLLAQSQEPLADPVADWAPEAPGLTPPPARVVELLNQEGLIETRPVPPG CHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCC DPGATDLTREPLRFPADRATRLQNLARGDEGFLLAMAYSTQRGYAHSHPFVAELRLGTVA CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECEEE LEIAPEELGFVISIGDIEITECEMVNQFAGSQSEPPQFTRGYGLAFGHSERKALAMSLVD EEECHHHCCEEEEECCEEEHHHHHHHHHCCCCCCCCCHHCCCCEEECCCHHHHHHHHHHH RALRADELGETVQSPAQMQEFVLSHSDSLEASGFVQHLKLPHYVDFQAELELVRKMRAAA HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHH RSPAGDDR CCCCCCCC >Mature Secondary Structure MYVAVKGGEAAIRSSYRRLAEQRRGDAAQPPLSVSQIRGQLKLAVDRVMTEGSVYDPELA CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ALAIKQAAGDLVEAIFLLRAYRATLPRLGSSCPVDTARMLLDRRISATFKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFTLLAQSQEPLADPVADWAPEAPGLTPPPARVVELLNQEGLIETRPVPPG CHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCC DPGATDLTREPLRFPADRATRLQNLARGDEGFLLAMAYSTQRGYAHSHPFVAELRLGTVA CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECEEE LEIAPEELGFVISIGDIEITECEMVNQFAGSQSEPPQFTRGYGLAFGHSERKALAMSLVD EEECHHHCCEEEEECCEEEHHHHHHHHHCCCCCCCCCHHCCCCEEECCCHHHHHHHHHHH RALRADELGETVQSPAQMQEFVLSHSDSLEASGFVQHLKLPHYVDFQAELELVRKMRAAA HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHH RSPAGDDR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]