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The map label for this gene is cheD1 [H]

Identifier: 120613011

GI number: 120613011

Start: 4868224

End: 4868985

Strand: Reverse

Name: cheD1 [H]

Synonym: Aave_4375

Alternate gene names: 120613011

Gene position: 4868985-4868224 (Counterclockwise)

Preceding gene: 120613012

Following gene: 120613010

Centisome position: 90.96

GC content: 64.3

Gene sequence:

>762_bases
ATGACTCCAAACCGCCCTGGCTCCCTCCCCGCGTCTGGTGCTTCGTCCCCTCCCTCGTCGATCGACGGGGCCGACCGCCG
CCGCGCTCCCCGCATCGCGCCCCTGAGCGCCGACATCTATTCGTCCGCGGCTGCGCCCGCCAAGCAATCGACGCTGCAGG
AACTGAAGGCCCGCGCACGCCGCCCCGGCGAAGCGTCCTTCTTCTTCTTCGATCATCATTTCCAGCACAACGCCGTCAAG
GTGCTGCCCGGCGAGTATTTCGTCTCGGACGAGAACCTCGTGATCATGACGGTGCTCGGGTCCTGCATCGCCGCCTGCCT
GTGGGACAGCCGCAGCCGCGTCGGCGGCATGAACCACTTCATGCTGCCCGACGGTGACTCCAACGACGTCTCCGGCCGCT
ACGGGTCCTACGCCATGGAACTGCTCATCAACGAGATGCTGAAGCTGGGCGCGCGCAGGGAAACCATGCAGGCCAAGGTC
TTCGGCGGCGGGCAGGTCATGCACAACTTCACCACCATGAACGTGGGTGAGCGCAACACCACCTTCGTGATGAATTACCT
GCAGACCGAGCGAATTCCCATCGTTTCCGAAGATGTGCTCGATATTTACCCGCGGAAGGTGGTATTTTTCCCCGTGACGG
GCAAGGCCATGGTCAAGCGGCTGGCACATGCCCATCCGGAGGCCCTGGTCGCCCAGGACGTCAAGGGCAACGCGGCTACC
GTGGCCAAGGCCACGGCCGGCGGGTCGGTGGACCTGTTTTGA

Upstream 100 bases:

>100_bases
GGCACGCGGAGAACTTCAGCGAATCCCGTGATCTTTTCAATTTGCGCGGCAAGACCGTCTATGAGCGCCGATAAAGGCCA
CATTCCGCAAGAAGCCCTCC

Downstream 100 bases:

>100_bases
TTGAGAAGGACAAGAGGGAATGAGCAGGAAGATCCGGGTGATCGTTGTGGATGATTCCGCGCTGGTGCGCAGTCTGCTGT
CGGAGATCATCAATCGGCAG

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTPNRPGSLPASGASSPPSSIDGADRRRAPRIAPLSADIYSSAAAPAKQSTLQELKARARRPGEASFFFFDHHFQHNAVK
VLPGEYFVSDENLVIMTVLGSCIAACLWDSRSRVGGMNHFMLPDGDSNDVSGRYGSYAMELLINEMLKLGARRETMQAKV
FGGGQVMHNFTTMNVGERNTTFVMNYLQTERIPIVSEDVLDIYPRKVVFFPVTGKAMVKRLAHAHPEALVAQDVKGNAAT
VAKATAGGSVDLF

Sequences:

>Translated_253_residues
MTPNRPGSLPASGASSPPSSIDGADRRRAPRIAPLSADIYSSAAAPAKQSTLQELKARARRPGEASFFFFDHHFQHNAVK
VLPGEYFVSDENLVIMTVLGSCIAACLWDSRSRVGGMNHFMLPDGDSNDVSGRYGSYAMELLINEMLKLGARRETMQAKV
FGGGQVMHNFTTMNVGERNTTFVMNYLQTERIPIVSEDVLDIYPRKVVFFPVTGKAMVKRLAHAHPEALVAQDVKGNAAT
VAKATAGGSVDLF
>Mature_252_residues
TPNRPGSLPASGASSPPSSIDGADRRRAPRIAPLSADIYSSAAAPAKQSTLQELKARARRPGEASFFFFDHHFQHNAVKV
LPGEYFVSDENLVIMTVLGSCIAACLWDSRSRVGGMNHFMLPDGDSNDVSGRYGSYAMELLINEMLKLGARRETMQAKVF
GGGQVMHNFTTMNVGERNTTFVMNYLQTERIPIVSEDVLDIYPRKVVFFPVTGKAMVKRLAHAHPEALVAQDVKGNAATV
AKATAGGSVDLF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 27463; Mature: 27331

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNRPGSLPASGASSPPSSIDGADRRRAPRIAPLSADIYSSAAAPAKQSTLQELKARAR
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHC
RPGEASFFFFDHHFQHNAVKVLPGEYFVSDENLVIMTVLGSCIAACLWDSRSRVGGMNHF
CCCCCEEEEEEECCCCCEEEEECCCEEECCCCEEHHHHHHHHHHHHHHCCHHHCCCCCEE
MLPDGDSNDVSGRYGSYAMELLINEMLKLGARRETMQAKVFGGGQVMHNFTTMNVGERNT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCEEEEEEEEEECCCCCH
TFVMNYLQTERIPIVSEDVLDIYPRKVVFFPVTGKAMVKRLAHAHPEALVAQDVKGNAAT
HHHEEHHHHCCCCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCEE
VAKATAGGSVDLF
EEEECCCCCEECC
>Mature Secondary Structure 
TPNRPGSLPASGASSPPSSIDGADRRRAPRIAPLSADIYSSAAAPAKQSTLQELKARAR
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHC
RPGEASFFFFDHHFQHNAVKVLPGEYFVSDENLVIMTVLGSCIAACLWDSRSRVGGMNHF
CCCCCEEEEEEECCCCCEEEEECCCEEECCCCEEHHHHHHHHHHHHHHCCHHHCCCCCEE
MLPDGDSNDVSGRYGSYAMELLINEMLKLGARRETMQAKVFGGGQVMHNFTTMNVGERNT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCEEEEEEEEEECCCCCH
TFVMNYLQTERIPIVSEDVLDIYPRKVVFFPVTGKAMVKRLAHAHPEALVAQDVKGNAAT
HHHEEHHHHCCCCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCEE
VAKATAGGSVDLF
EEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA