| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612972
Identifier: 120612972
GI number: 120612972
Start: 4813566
End: 4813949
Strand: Direct
Name: 120612972
Synonym: Aave_4336
Alternate gene names: NA
Gene position: 4813566-4813949 (Clockwise)
Preceding gene: 120612971
Following gene: 120612973
Centisome position: 89.93
GC content: 52.86
Gene sequence:
>384_bases ATGGCAAGTAACAACAAAAAAATGAGGACCCAGACACTCTGGATGGTCCTCGCCCTTGGGCTGGCAGCTTTCGTTTGGTA TGCCAGCAAGCCCGTCTTCAAAGGCTCAGAAACCAGCCCAATGAATGTTTATCGCATCGAATACTATGATGCTTCGCCCA TCCAACGCATCCTGCACTACCAAATGAAGACACCTTCATTTGTCCGGCTATACCGCATCCAGCCTGAAACCCTGTTGGGC GAGAGTGAGATTGTCGATATCTGGATGAATGGCACACTTCATTGGTGGACCGATCCCCCAGCCCATGCCGTCGTGGTTGG TAGCAGTGTGGTGTTCGAAAACATACCGGCGGAGTGTCCGGCAGCCACCAGTTGCCCACGCTGA
Upstream 100 bases:
>100_bases AAAAATGGCGCACAAAAAATCAGCACGGCGGAGATTTCATGGTCTTATCCGATGTGCATCGTGTGCGCCTGCCATTTCCG CAAAAGTTCGAAATTTAACA
Downstream 100 bases:
>100_bases CCATCAACGCGCTCACGCTGTCCTCGAATGCTCTTGTCGCAGCACCTGACCGATGTGACCCACCGGACACTGGCTATTTC GAAATCGGACGTCCACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MASNNKKMRTQTLWMVLALGLAAFVWYASKPVFKGSETSPMNVYRIEYYDASPIQRILHYQMKTPSFVRLYRIQPETLLG ESEIVDIWMNGTLHWWTDPPAHAVVVGSSVVFENIPAECPAATSCPR
Sequences:
>Translated_127_residues MASNNKKMRTQTLWMVLALGLAAFVWYASKPVFKGSETSPMNVYRIEYYDASPIQRILHYQMKTPSFVRLYRIQPETLLG ESEIVDIWMNGTLHWWTDPPAHAVVVGSSVVFENIPAECPAATSCPR >Mature_126_residues ASNNKKMRTQTLWMVLALGLAAFVWYASKPVFKGSETSPMNVYRIEYYDASPIQRILHYQMKTPSFVRLYRIQPETLLGE SEIVDIWMNGTLHWWTDPPAHAVVVGSSVVFENIPAECPAATSCPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14451; Mature: 14320
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNNKKMRTQTLWMVLALGLAAFVWYASKPVFKGSETSPMNVYRIEYYDASPIQRILHY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH QMKTPSFVRLYRIQPETLLGESEIVDIWMNGTLHWWTDPPAHAVVVGSSVVFENIPAECP HCCCCCEEEEEEECCHHHCCCCEEEEEEECCEEEECCCCCCCEEEECCEEEECCCCCCCC AATSCPR CCCCCCC >Mature Secondary Structure ASNNKKMRTQTLWMVLALGLAAFVWYASKPVFKGSETSPMNVYRIEYYDASPIQRILHY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH QMKTPSFVRLYRIQPETLLGESEIVDIWMNGTLHWWTDPPAHAVVVGSSVVFENIPAECP HCCCCCEEEEEEECCHHHCCCCEEEEEEECCEEEECCCCCCCEEEECCEEEECCCCCCCC AATSCPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA