Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612970

Identifier: 120612970

GI number: 120612970

Start: 4812672

End: 4813256

Strand: Direct

Name: 120612970

Synonym: Aave_4334

Alternate gene names: NA

Gene position: 4812672-4813256 (Clockwise)

Preceding gene: 120612966

Following gene: 120612971

Centisome position: 89.91

GC content: 50.26

Gene sequence:

>585_bases
GTGATCCACATATTGCAAGACACGCTTTCATCAATCAGCGGCAGTTCAAAGAAAAAACAACCAACTTACCAAACAAGAAT
TTTTCAGTTACGAGACATTCCCAATGTCATGCGCTCAAGGCTGGGATGGCCTGTGGCTGCCAGCTTGATGGAAAGGTGGT
TCAAAGGAGCACCATTTGCGATGCCAGCAGAAATGAAGGAAAGTCGTGGAATATACCCATTAAAAAATCTGAGCCAAGCT
CACCTCGATGAGTCCTCGGTCAAAATGTCCTGGGCCCTTCAATTCAACAGGGTACGTACGGCGATGCAACAGTTGCAGAC
GACGTGGTCCAGTCCTGCGGGAATCAAGCAGCTAAAAGTGAGAGTGAATCGTGCCGCACCAGCGCGTGCCGGCCAGTGCT
GGCGATTCGGCAATCTGGGACTTCCCGCAAAGGAACTGGATGATTCTTGCCAAGTGAATTTCCTACTGTTTGGGAAGATG
GGGGACCCCATGGACGACTTCTATGGCGGCCATGGGCGAGGCCCAGATAAAGATTGCAGTGTCTGGCATTGTGACATCTA
CGGAAAACAAAAAGGCATCGACTGA

Upstream 100 bases:

>100_bases
GCACAACCTCATGACGACGCTCAAGTAGTTACAGCCTGACGACTAGATCAGTCGAAATACATTGCCACGGCGCTCATATT
AATAAATAAGAGGGACTTTT

Downstream 100 bases:

>100_bases
AGTTGATGAACTGGGCTTCTATCTGCGGGATTCCTACGATTTCCAGGACGGCAATAATTTTATTTCCCAGCCCCTGGGGT
GCTGGGGATTTAATGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIHILQDTLSSISGSSKKKQPTYQTRIFQLRDIPNVMRSRLGWPVAASLMERWFKGAPFAMPAEMKESRGIYPLKNLSQA
HLDESSVKMSWALQFNRVRTAMQQLQTTWSSPAGIKQLKVRVNRAAPARAGQCWRFGNLGLPAKELDDSCQVNFLLFGKM
GDPMDDFYGGHGRGPDKDCSVWHCDIYGKQKGID

Sequences:

>Translated_194_residues
MIHILQDTLSSISGSSKKKQPTYQTRIFQLRDIPNVMRSRLGWPVAASLMERWFKGAPFAMPAEMKESRGIYPLKNLSQA
HLDESSVKMSWALQFNRVRTAMQQLQTTWSSPAGIKQLKVRVNRAAPARAGQCWRFGNLGLPAKELDDSCQVNFLLFGKM
GDPMDDFYGGHGRGPDKDCSVWHCDIYGKQKGID
>Mature_194_residues
MIHILQDTLSSISGSSKKKQPTYQTRIFQLRDIPNVMRSRLGWPVAASLMERWFKGAPFAMPAEMKESRGIYPLKNLSQA
HLDESSVKMSWALQFNRVRTAMQQLQTTWSSPAGIKQLKVRVNRAAPARAGQCWRFGNLGLPAKELDDSCQVNFLLFGKM
GDPMDDFYGGHGRGPDKDCSVWHCDIYGKQKGID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21908; Mature: 21908

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHILQDTLSSISGSSKKKQPTYQTRIFQLRDIPNVMRSRLGWPVAASLMERWFKGAPFA
CEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCC
MPAEMKESRGIYPLKNLSQAHLDESSVKMSWALQFNRVRTAMQQLQTTWSSPAGIKQLKV
CCCHHHHCCCCCCCHHCHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RVNRAAPARAGQCWRFGNLGLPAKELDDSCQVNFLLFGKMGDPMDDFYGGHGRGPDKDCS
HHCCCCCCCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCC
VWHCDIYGKQKGID
EEEEEECCCCCCCC
>Mature Secondary Structure
MIHILQDTLSSISGSSKKKQPTYQTRIFQLRDIPNVMRSRLGWPVAASLMERWFKGAPFA
CEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCC
MPAEMKESRGIYPLKNLSQAHLDESSVKMSWALQFNRVRTAMQQLQTTWSSPAGIKQLKV
CCCHHHHCCCCCCCHHCHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RVNRAAPARAGQCWRFGNLGLPAKELDDSCQVNFLLFGKMGDPMDDFYGGHGRGPDKDCS
HHCCCCCCCCCCCEECCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCC
VWHCDIYGKQKGID
EEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA