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The map label for this gene is yhcQ [C]

Identifier: 120612961

GI number: 120612961

Start: 4803928

End: 4804896

Strand: Direct

Name: yhcQ [C]

Synonym: Aave_4325

Alternate gene names: 120612961

Gene position: 4803928-4804896 (Clockwise)

Preceding gene: 120612960

Following gene: 120612962

Centisome position: 89.75

GC content: 76.06

Gene sequence:

>969_bases
ATGAAACGCCTCTCCCTTCCCCTCGGGCCGCGCGCCGCGCGCGGCGCCGTCTGCGCGGCCTCCGCGCTGGCCCTCGCCTG
GCTCGCGGCCTGCACCGACCGCGGCACCCCCGCGCAGATGCCCGCGCCCGAGGCGCCCGCATCCGCTCCGGCCGCCGGCG
CGGCCACGGGCGTGGCCATCGCCCGGGGCCGCGTCGAAGTGCAGGGCGGAATGCTCGAACTCTCGCCCCTGCAAGAGGGC
GTGGTGGACACCGTCGCCGTGCACGAAGGCCAGGCCGTGAAGCGCGGACAGGTGCTGCTGCGCCTGTCCGGCACCGGCCT
GCAGGCCGAGGCCGGCGTGGCGCAGGCGGAGCTGCAACTGGCGGAAGCGCGCGAACGCGCACGCGCCCAGCAGGTGCCCG
CGCTGCGCCGCGCTGCCGCCCGGCTCGCCGAAGCCGCCGCCGCCAACGCCGCCGAGCCGCAGCGCGCCGAAGATGCCGCC
CAGGCCCTGCGCGCCGCCGAATCCGACGCCGCCGTGGCGCGCGCGGAGGTCGAAGTGGCGCGAAAAAAACTCGCCCAGGT
GCGCGGCCAGCAGGCACGCCTCGAACTGCGTGCTCCCGAAGACGGCACCGTGGTGCATGTCAGGGCCCAGGCCGGCGTAC
GCCTGGCTGCCGCAGCCGGCCATGCCGCGATCACGCTGCTGCCGCACCGGCCGCTGGTCGTGCGGGCGGAGGTCAACCAG
AACTACGCGGCCGCGGTGAAGCCGGGGATGCGCGCCACGGTCACGACCGACGGCGACGCCGCCCCGGTCGCCCTGCCCGC
CGCGCGGGTAGTGCGCATCAGTCCCGTGCTCGGCACGTCGCGGCTGCAGGAGGACGCCCAGCGCGGCCCGATGCGGGTCG
TCGAGTGCGTGCTCGAATTCGACAGTCCTCCGGAAGCACGCCCCGGGCAGACCGTGCGCGTGAGCTTCCTTCCCCTGAAG
CAGGAGTGA

Upstream 100 bases:

>100_bases
TGAGCCACGACCCGCGCCTCGTCCGCCATGCCGACCGCGTGCTCGGCATGGAAGACGGCGCCATCCGCAGCGACTGGCGC
CAGCCGGACGCCATCACCCC

Downstream 100 bases:

>100_bases
TCCCCATGAAGACTGCGTCCTTTCCCCTGTCATCGCTGCGGCGCCCGGCCCTTCCCGCCCGGGATCGCGCACAGGCCCCT
GCGGGCTGGATGGTCCAGTG

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: Secretion Protein HlyD; HlyD Family Secretion Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKRLSLPLGPRAARGAVCAASALALAWLAACTDRGTPAQMPAPEAPASAPAAGAATGVAIARGRVEVQGGMLELSPLQEG
VVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQLAEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAA
QALRAAESDAAVARAEVEVARKKLAQVRGQQARLELRAPEDGTVVHVRAQAGVRLAAAAGHAAITLLPHRPLVVRAEVNQ
NYAAAVKPGMRATVTTDGDAAPVALPAARVVRISPVLGTSRLQEDAQRGPMRVVECVLEFDSPPEARPGQTVRVSFLPLK
QE

Sequences:

>Translated_322_residues
MKRLSLPLGPRAARGAVCAASALALAWLAACTDRGTPAQMPAPEAPASAPAAGAATGVAIARGRVEVQGGMLELSPLQEG
VVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQLAEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAA
QALRAAESDAAVARAEVEVARKKLAQVRGQQARLELRAPEDGTVVHVRAQAGVRLAAAAGHAAITLLPHRPLVVRAEVNQ
NYAAAVKPGMRATVTTDGDAAPVALPAARVVRISPVLGTSRLQEDAQRGPMRVVECVLEFDSPPEARPGQTVRVSFLPLK
QE
>Mature_322_residues
MKRLSLPLGPRAARGAVCAASALALAWLAACTDRGTPAQMPAPEAPASAPAAGAATGVAIARGRVEVQGGMLELSPLQEG
VVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQLAEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAA
QALRAAESDAAVARAEVEVARKKLAQVRGQQARLELRAPEDGTVVHVRAQAGVRLAAAAGHAAITLLPHRPLVVRAEVNQ
NYAAAVKPGMRATVTTDGDAAPVALPAARVVRISPVLGTSRLQEDAQRGPMRVVECVLEFDSPPEARPGQTVRVSFLPLK
QE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33291; Mature: 33291

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLPLGPRAARGAVCAASALALAWLAACTDRGTPAQMPAPEAPASAPAAGAATGVAI
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHE
ARGRVEVQGGMLELSPLQEGVVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQL
ECCEEEEECCEEEECHHHCCHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
AEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAAQALRAAESDAAVARAEVEVA
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
RKKLAQVRGQQARLELRAPEDGTVVHVRAQAGVRLAAAAGHAAITLLPHRPLVVRAEVNQ
HHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCEEEEEECCC
NYAAAVKPGMRATVTTDGDAAPVALPAARVVRISPVLGTSRLQEDAQRGPMRVVECVLEF
CEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHC
DSPPEARPGQTVRVSFLPLKQE
CCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MKRLSLPLGPRAARGAVCAASALALAWLAACTDRGTPAQMPAPEAPASAPAAGAATGVAI
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHE
ARGRVEVQGGMLELSPLQEGVVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQL
ECCEEEEECCEEEECHHHCCHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
AEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAAQALRAAESDAAVARAEVEVA
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
RKKLAQVRGQQARLELRAPEDGTVVHVRAQAGVRLAAAAGHAAITLLPHRPLVVRAEVNQ
HHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCEEEEEECCC
NYAAAVKPGMRATVTTDGDAAPVALPAARVVRISPVLGTSRLQEDAQRGPMRVVECVLEF
CEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHC
DSPPEARPGQTVRVSFLPLKQE
CCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA