Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 120612943

GI number: 120612943

Start: 4783399

End: 4784148

Strand: Reverse

Name: etfB [H]

Synonym: Aave_4307

Alternate gene names: 120612943

Gene position: 4784148-4783399 (Counterclockwise)

Preceding gene: 120612944

Following gene: 120612942

Centisome position: 89.38

GC content: 65.07

Gene sequence:

>750_bases
ATGAAAATCCTGGTCCCCGTCAAGCGCGTGGTGGACTACAACGTGAAGGTCCGCGTGAAGTCGGACAACACGGGTGTGGA
CATCGCGAACGTGAAGATGAGCATGAATCCGTTCGACGAGATCGCGGTGGAAGAGGCCGTGCGGTTGAAGGAAAAGGGCG
TGGCCACCGAGGTGATCGCGGTTTCCTGCGGCGTCACGCAGTGCCAGGAGACGCTGCGCACGGCGATGGCGATCGGCGCG
GACCGCGCGATCCTGGTGGAGACGGCGGAAGAGCTGCAGCCGCTGGCCGTGGCCAAGATCCTCAAGGCCCTGGTGGACAA
GGAGCAGCCGCAACTGGTCATCCTGGGCAAGCAGGCGATCGACGACGACTCCAACCAGACCGGGCAGATGCTGGCCGCGC
TCGCGGACCTGCCGCAGGCCACCTTCGCTTCCAAGGTGGAGGTGAACGGCGACAAGGTGAACGTGACGCGCGAGGTCGAT
GGCGGCCTGGAGACGCTGGCGCTCGCGCTGCCGGCGATCGTCACCACCGACCTGCGCCTGAACGAGCCGCGCTACGTGAC
GCTGCCCAACATCATGAAGGCCAAGAAGAAGCAGCTCGACACCGTCAAGCCCGAGGACCTGGGCGTGGATGTTGCGCCGC
GCCTCAAGACCCTGAAAGTGACGGAGCCCCCGAAGCGCGGCGCGGGCGTGAAGGTGCCGGACGTCGCCACGCTGGTGGAC
AAGCTCAAGAACGAAGCGAAGGTGATTTGA

Upstream 100 bases:

>100_bases
GGCGGGATCATCCGCGACAAGGGCATCGCATCCGAGTGACCGGGCGTCCCGGCCCCATCCATTTCTTCTTTTTCCATCCT
TTATCCAACGAGGTCATCCC

Downstream 100 bases:

>100_bases
CCCCCTGGGCCGCTACGCGTCATCCCCCCAGGGGGACGACACCCTCGGTGCGGGGCGGCCCTTCCTCGGTGTCCCTCGCA
TCGGCCGCGCCGGAACTGAA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGVATEVIAVSCGVTQCQETLRTAMAIGA
DRAILVETAEELQPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALADLPQATFASKVEVNGDKVNVTREVD
GGLETLALALPAIVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVTEPPKRGAGVKVPDVATLVD
KLKNEAKVI

Sequences:

>Translated_249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGVATEVIAVSCGVTQCQETLRTAMAIGA
DRAILVETAEELQPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALADLPQATFASKVEVNGDKVNVTREVD
GGLETLALALPAIVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVTEPPKRGAGVKVPDVATLVD
KLKNEAKVI
>Mature_249_residues
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGVATEVIAVSCGVTQCQETLRTAMAIGA
DRAILVETAEELQPLAVAKILKALVDKEQPQLVILGKQAIDDDSNQTGQMLAALADLPQATFASKVEVNGDKVNVTREVD
GGLETLALALPAIVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVTEPPKRGAGVKVPDVATLVD
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=63.0952380952381, Blast_Score=309, Evalue=1e-84,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=62.8691983122363, Blast_Score=287, Evalue=6e-78,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=25.1082251082251, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=56.9169960474308, Blast_Score=263, Evalue=4e-71,
Organism=Saccharomyces cerevisiae, GI6321646, Length=254, Percent_Identity=50.7874015748031, Blast_Score=229, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=58.9641434262948, Blast_Score=266, Evalue=8e-72,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=58.9641434262948, Blast_Score=266, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26878; Mature: 26878

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSCGVTQCQETLRTAMAIGADRAILVETAEELQPLAVAKILKALVDKEQPQLVILGKQAI
EECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALADLPQATFASKVEVNGDKVNVTREVDGGLETLALALPAIVTTDLRL
CCCCCHHHHHHHHHHHCCHHHHHCEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVTEPPKRGAGVKVPDVATLVD
CCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKILVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGVATEVIA
CEEEEECHHHHCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSCGVTQCQETLRTAMAIGADRAILVETAEELQPLAVAKILKALVDKEQPQLVILGKQAI
EECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALADLPQATFASKVEVNGDKVNVTREVDGGLETLALALPAIVTTDLRL
CCCCCHHHHHHHHHHHCCHHHHHCEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVTEPPKRGAGVKVPDVATLVD
CCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]