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The map label for this gene is ybhP [H]

Identifier: 120612934

GI number: 120612934

Start: 4773089

End: 4773868

Strand: Direct

Name: ybhP [H]

Synonym: Aave_4298

Alternate gene names: 120612934

Gene position: 4773089-4773868 (Clockwise)

Preceding gene: 120612933

Following gene: 120612935

Centisome position: 89.17

GC content: 68.21

Gene sequence:

>780_bases
ATGGCATCCATGGCTACCCACGCAGAATCCCCCGCTCCCATCGCGTTCAAGGTGCTGACCGTGAACGTGCACAAGGGCTT
CACCTCCTTCAATCGCCGTTTCATGCTGCACGAGCTGCGCGAGGCTGTGCGCGGCGTATCGGCGGATATCGTCTTCCTGC
AGGAGGTGCTCGGCACGCACCAGCGCCACGCCAACCGCGTGGCCAATTTCCCGCAGGAGCCGCACTACGAATTCCTGGCC
GACACGATCTGGGGCCAGTACGCCTACGGCCGCAATGCGGTGTACGACAACGGGCACCACGGCAATGCGCTGCTGTCCAA
GTTCCCCATCGTCCACTACGAGAACCATGACATCTCCGTGAGCGGCCCGGAGCGGCGCGGCATGCTGCACTGCGTGCTGC
AGCCGCCGGGGCACGACCGCCAGGTGCATGCCATCTGCGTGCACCTGGGGCTGCAGGAGGCGCACCGCCAGCGCCAGTTG
CGGCGCGTGTGCGACCTGGTCAACACCTTCCCCGGCGACGATCCCGTGATCGTGGCGGGCGACTTCAACGACTGGCGCGG
CCGCGCCCACGAGGTGCTGCGCAAGGGCGCGGGGCTGCACGAGGTGTTCGTGCATGCGGGCGGTCGCGCGGTGCGCACGT
TCCCGGCCTCGATGCCGCTGCTGGCCCTCGACCGCATCTACGTGCGCAACGCGTCGGTGCATGCCCCCGTGGTGCTGCCG
CGCAAGCCCTGGCACAAGCTGTCGGACCACGCGCCGCTGGCGGCGGAGATCGCGCTATGA

Upstream 100 bases:

>100_bases
GCAGTCCTACAGCACGGCCGGGCGGGGGTCGGAACAATCGGTTCCAACCCTGCGCCGCGGCCGGCGGCCCGTCCGCCATG
GCCGCGGTGCCTTCCTACCG

Downstream 100 bases:

>100_bases
CACGGCCGGGCCGCTCCTCGCGCTGGGTACCGGGCAACCGCTTCGAGCTGCTGGAAAACGGCGAGGCCTTCTTCCCGCGC
GTGTTCGAGGCGATCGCGGC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MASMATHAESPAPIAFKVLTVNVHKGFTSFNRRFMLHELREAVRGVSADIVFLQEVLGTHQRHANRVANFPQEPHYEFLA
DTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDISVSGPERRGMLHCVLQPPGHDRQVHAICVHLGLQEAHRQRQL
RRVCDLVNTFPGDDPVIVAGDFNDWRGRAHEVLRKGAGLHEVFVHAGGRAVRTFPASMPLLALDRIYVRNASVHAPVVLP
RKPWHKLSDHAPLAAEIAL

Sequences:

>Translated_259_residues
MASMATHAESPAPIAFKVLTVNVHKGFTSFNRRFMLHELREAVRGVSADIVFLQEVLGTHQRHANRVANFPQEPHYEFLA
DTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDISVSGPERRGMLHCVLQPPGHDRQVHAICVHLGLQEAHRQRQL
RRVCDLVNTFPGDDPVIVAGDFNDWRGRAHEVLRKGAGLHEVFVHAGGRAVRTFPASMPLLALDRIYVRNASVHAPVVLP
RKPWHKLSDHAPLAAEIAL
>Mature_258_residues
ASMATHAESPAPIAFKVLTVNVHKGFTSFNRRFMLHELREAVRGVSADIVFLQEVLGTHQRHANRVANFPQEPHYEFLAD
TIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDISVSGPERRGMLHCVLQPPGHDRQVHAICVHLGLQEAHRQRQLR
RVCDLVNTFPGDDPVIVAGDFNDWRGRAHEVLRKGAGLHEVFVHAGGRAVRTFPASMPLLALDRIYVRNASVHAPVVLPR
KPWHKLSDHAPLAAEIAL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=246, Percent_Identity=61.3821138211382, Blast_Score=319, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29060; Mature: 28928

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMATHAESPAPIAFKVLTVNVHKGFTSFNRRFMLHELREAVRGVSADIVFLQEVLGTH
CCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QRHANRVANFPQEPHYEFLADTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDISV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEECCCEEEE
SGPERRGMLHCVLQPPGHDRQVHAICVHLGLQEAHRQRQLRRVCDLVNTFPGDDPVIVAG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
DFNDWRGRAHEVLRKGAGLHEVFVHAGGRAVRTFPASMPLLALDRIYVRNASVHAPVVLP
CCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEC
RKPWHKLSDHAPLAAEIAL
CCCCHHHCCCCCCEEEECC
>Mature Secondary Structure 
ASMATHAESPAPIAFKVLTVNVHKGFTSFNRRFMLHELREAVRGVSADIVFLQEVLGTH
CCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QRHANRVANFPQEPHYEFLADTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDISV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEECCCEEEE
SGPERRGMLHCVLQPPGHDRQVHAICVHLGLQEAHRQRQLRRVCDLVNTFPGDDPVIVAG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
DFNDWRGRAHEVLRKGAGLHEVFVHAGGRAVRTFPASMPLLALDRIYVRNASVHAPVVLP
CCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEC
RKPWHKLSDHAPLAAEIAL
CCCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]