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The map label for this gene is rdoA [H]

Identifier: 120612911

GI number: 120612911

Start: 4737052

End: 4738080

Strand: Direct

Name: rdoA [H]

Synonym: Aave_4275

Alternate gene names: 120612911

Gene position: 4737052-4738080 (Clockwise)

Preceding gene: 120612910

Following gene: 120612912

Centisome position: 88.5

GC content: 71.91

Gene sequence:

>1029_bases
ATGCACCATCCACCAGCGCCTGAGCGCGACGACCTCCACCCCTACGCCCTCCTCACGCCCGACCTCGTGCTGGACGCGCT
CGCGTCCATCGGCCTGCACGGCGACGGCCGGCTCATGGCCCTGGGTTCCTACGAGAACCGCGTCTATCAGGTACACCTGG
AGGACGGCACGCGCGTGGTCGCCAAGTTCTACCGCCCGGGCCGCTGGAGCGAGGCGCAGATCCTGGAGGAGCATGCCTTC
TCCGCCGAGCTGGCCGAAGCCGAGGTGCCGGTCGTCGCACCGCTCGCCGTGGAGGGCCGCACGCTGCACGCGCATGCGGG
CTTCGCGTTTTCCGTGAGCCCCTGGCGCGGCGGCCGCACGCCCGACCTGGACGACTTCGAGGCCCTGGAATGGATCGGCC
GCTTTCTCGCGCGCATCCACACCGTGGGCGCGGCGCGGCCGTTCGCGCACCGCCCGGCGCTGGATGTGCGCAGCTTCGCC
GCCGAGCCGCGCGACGCCCTGCTGCAGGCGGAGGCGATCCCGCTGGACCAGCAGTCGGCCTGGACCGCCGCCTGCGGCGA
TGCCATCGCGCTGATCGAGGAAAAGATGGCGGGCACCGGTGCCACCGCGCCGTGTGCCGTGCTGCGCCTGCACGGCGACT
GCCACCCGGGCAACGTGCTCTGGACGCCCGCCGACCTGCCCGGCGGCGGGCCGCATTTCGTGGACCTGGACGACGCGCGC
ATGGGCCCGGCCGTGCAGGACCTGTGGATGCTGCTGTCGGGCGAGCGGCGCCAGCGCACGCAGCAACTCTCGGCCCTGCT
GGACGGCTACGAGCAGTTCCGGGACTTCGACCGCCGCGAACTCGCGCTGATCGAGCCGCTGCGCACGCTGCGCCTCATCC
ATTACAGCGCCTGGCTCGCGCGGCGCTGGAGCGATCCGATCTTCCCGATCAACTTCCCGTGGTTCGGCAGCAGCGATTAC
TGGCGCGGCCAGGTGGACATGCTGCGCGAGCAGATCGAGGCGATGCAGGAGGAGCCGCTGGCGGCGTGA

Upstream 100 bases:

>100_bases
CAGCGCTTCATCGACACCATCCCGCTGCGGGTGGTGCGGGATGCGCCCTGTACGGTCATCCTCGTGAAGCCGCAGCAGCC
CGCCAGCGACAATGCCGGCC

Downstream 100 bases:

>100_bases
AACGCAGGAAGCACGGCCGCGTCCACAGCGCACCACGGCCGCGCAGGAAACGCAAACAATTGTCAAATTCCACGCCTGGC
GCACGCGGGACGTTAGTTTT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MHHPPAPERDDLHPYALLTPDLVLDALASIGLHGDGRLMALGSYENRVYQVHLEDGTRVVAKFYRPGRWSEAQILEEHAF
SAELAEAEVPVVAPLAVEGRTLHAHAGFAFSVSPWRGGRTPDLDDFEALEWIGRFLARIHTVGAARPFAHRPALDVRSFA
AEPRDALLQAEAIPLDQQSAWTAACGDAIALIEEKMAGTGATAPCAVLRLHGDCHPGNVLWTPADLPGGGPHFVDLDDAR
MGPAVQDLWMLLSGERRQRTQQLSALLDGYEQFRDFDRRELALIEPLRTLRLIHYSAWLARRWSDPIFPINFPWFGSSDY
WRGQVDMLREQIEAMQEEPLAA

Sequences:

>Translated_342_residues
MHHPPAPERDDLHPYALLTPDLVLDALASIGLHGDGRLMALGSYENRVYQVHLEDGTRVVAKFYRPGRWSEAQILEEHAF
SAELAEAEVPVVAPLAVEGRTLHAHAGFAFSVSPWRGGRTPDLDDFEALEWIGRFLARIHTVGAARPFAHRPALDVRSFA
AEPRDALLQAEAIPLDQQSAWTAACGDAIALIEEKMAGTGATAPCAVLRLHGDCHPGNVLWTPADLPGGGPHFVDLDDAR
MGPAVQDLWMLLSGERRQRTQQLSALLDGYEQFRDFDRRELALIEPLRTLRLIHYSAWLARRWSDPIFPINFPWFGSSDY
WRGQVDMLREQIEAMQEEPLAA
>Mature_342_residues
MHHPPAPERDDLHPYALLTPDLVLDALASIGLHGDGRLMALGSYENRVYQVHLEDGTRVVAKFYRPGRWSEAQILEEHAF
SAELAEAEVPVVAPLAVEGRTLHAHAGFAFSVSPWRGGRTPDLDDFEALEWIGRFLARIHTVGAARPFAHRPALDVRSFA
AEPRDALLQAEAIPLDQQSAWTAACGDAIALIEEKMAGTGATAPCAVLRLHGDCHPGNVLWTPADLPGGGPHFVDLDDAR
MGPAVQDLWMLLSGERRQRTQQLSALLDGYEQFRDFDRRELALIEPLRTLRLIHYSAWLARRWSDPIFPINFPWFGSSDY
WRGQVDMLREQIEAMQEEPLAA

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=326, Percent_Identity=47.239263803681, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38139; Mature: 38139

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHPPAPERDDLHPYALLTPDLVLDALASIGLHGDGRLMALGSYENRVYQVHLEDGTRVV
CCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCEEH
AKFYRPGRWSEAQILEEHAFSAELAEAEVPVVAPLAVEGRTLHAHAGFAFSVSPWRGGRT
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCC
PDLDDFEALEWIGRFLARIHTVGAARPFAHRPALDVRSFAAEPRDALLQAEAIPLDQQSA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCC
WTAACGDAIALIEEKMAGTGATAPCAVLRLHGDCHPGNVLWTPADLPGGGPHFVDLDDAR
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCC
MGPAVQDLWMLLSGERRQRTQQLSALLDGYEQFRDFDRRELALIEPLRTLRLIHYSAWLA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RRWSDPIFPINFPWFGSSDYWRGQVDMLREQIEAMQEEPLAA
HHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHHPPAPERDDLHPYALLTPDLVLDALASIGLHGDGRLMALGSYENRVYQVHLEDGTRVV
CCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCEEH
AKFYRPGRWSEAQILEEHAFSAELAEAEVPVVAPLAVEGRTLHAHAGFAFSVSPWRGGRT
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCC
PDLDDFEALEWIGRFLARIHTVGAARPFAHRPALDVRSFAAEPRDALLQAEAIPLDQQSA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCC
WTAACGDAIALIEEKMAGTGATAPCAVLRLHGDCHPGNVLWTPADLPGGGPHFVDLDDAR
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCC
MGPAVQDLWMLLSGERRQRTQQLSALLDGYEQFRDFDRRELALIEPLRTLRLIHYSAWLA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RRWSDPIFPINFPWFGSSDYWRGQVDMLREQIEAMQEEPLAA
HHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]