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The map label for this gene is 120612891

Identifier: 120612891

GI number: 120612891

Start: 4715506

End: 4716831

Strand: Reverse

Name: 120612891

Synonym: Aave_4255

Alternate gene names: NA

Gene position: 4716831-4715506 (Counterclockwise)

Preceding gene: 120612892

Following gene: 120612888

Centisome position: 88.12

GC content: 72.47

Gene sequence:

>1326_bases
ATGCTGCCGCAGCGGCGCCGTGGCGCCCTCGAGAAGGTCCGGGCTTGGCTGACGCAGGCGCTGGAAAGCGAGCGCCTCAT
CGACATGGACGCCCGTTTCCTGTTCGAAGGCGGCGTGGTGTCCCTGCTGGCGGATGGCTGGCGGCCGGGCCACGAGTATC
TGTTCGGTCCAGCGATGGAGTGCTTCGGCTGGCGCAACGATCGCGGCAGGCTGGCCGCGTTCGGACACGCCGGGGCAGTG
GTCGCGTCCGCCATCGATGAACTCGACTTCTACGACGCGCAGCCGAAGAAGGTGCGGACCGCCCAGCGGGACCTCATCCG
CCGGCTGCGGGACGGCCGGCGTCCGCGCACGGGCTTCCTGCTGCGGCAGCTTCCCGGGGCGCTGCATCTGCGCAGGCTGT
TCCCGCACTGGCTGCACGTGATCACCGCGGTGGGCAACGTGGAGCAGTGGAGCGAGTGGGCGGATGCCGTGCCGCGGTGG
CGCCGCTGGCTGACCTATGCGCCGTCGAGGGCACCCGGGCCGGCTTGCGCACCGTCTTCGGTGTCCCGTTCCCCCGGCCG
CATCGGCAACGGCTGGATCATCTTCGCCGTGCTGGTCGTCTGTACCCTGCTGCGGATGTGCCTGCAGAACACCTCGCTGC
CGGCGTCGCCTTCGCCACCTGCGCCCGTGCACGGCAGCCTGCCTTCCGGAGCCGGGGCGTCCGGCGCTTCCACCGGCCTG
CCGCCCCGGGAGCCGGTGGGTGCCGTGCCTCCGTCGCTCTCCGCCCGGCCCGTCCCGGTCAAGCCCCTGCAGCCCGTCTA
TCCCGCCGAGGCCCGTCGCCGGGGGCTCGAAGGGCGCGTCGTCGTCTCCGCCGCCATCGGTGTCACGGGACAGACGCGGG
ACGTCTCCATCGCCCAGAGCTCCGGCCACCGGGAACTGGACGAGTCGGCCCTGGCCGCGGTGCGCAATGCCACCTTCCAC
CCCGCCAGGGACAGCCAGGGGCACGCCGTGGACGCACGCTACCGCATCCCGTTCCGTTTCGAGCTGTCGGACAAGCCCGC
TGCCGACGCCTCGGCCGGGCCGCGCGCCCATGCCCAGCGGATCCGGGACGCTTTCCAGCCGCAGATCGTCCTGCCGGAGG
GGCTTTCCGGCAATCCCGCGGCCGAGCTCCGGTTGCGCCTGAGCGCTCAGGGTGCCATCGAAAGCTACCGGTTGGTGCAG
CCCAGCGGCAGCAAGGCCTGGGACGACGCCGTGCTGCGCGCGGCGGCCCGCGTCAAGCGGGTGCCCGCGGATGACGAGGG
GCAGTTTCCCCCGGAGATGGTGATCACGTTCCGGCCCCGGCCCTGA

Upstream 100 bases:

>100_bases
GGAGCCGGGCGGCGGCCCTGGCGATGCGGCCGTGCTCCGGCATGCCGCCGCCCGGGCCGCGGCAAGCGCGGCCCGCGGGG
TTTTCGAGGAAATGCGAGCG

Downstream 100 bases:

>100_bases
GGGAGGCGTTCGCTCCGTCCGCCGCAGGGGCGGTGCCGCCGAAATCCCAGGCCTCCAGCAGTTCGGGGGCCCGCCGCTCG
GTCACGCCGTTCGCGTGCGC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLPQRRRGALEKVRAWLTQALESERLIDMDARFLFEGGVVSLLADGWRPGHEYLFGPAMECFGWRNDRGRLAAFGHAGAV
VASAIDELDFYDAQPKKVRTAQRDLIRRLRDGRRPRTGFLLRQLPGALHLRRLFPHWLHVITAVGNVEQWSEWADAVPRW
RRWLTYAPSRAPGPACAPSSVSRSPGRIGNGWIIFAVLVVCTLLRMCLQNTSLPASPSPPAPVHGSLPSGAGASGASTGL
PPREPVGAVPPSLSARPVPVKPLQPVYPAEARRRGLEGRVVVSAAIGVTGQTRDVSIAQSSGHRELDESALAAVRNATFH
PARDSQGHAVDARYRIPFRFELSDKPAADASAGPRAHAQRIRDAFQPQIVLPEGLSGNPAAELRLRLSAQGAIESYRLVQ
PSGSKAWDDAVLRAAARVKRVPADDEGQFPPEMVITFRPRP

Sequences:

>Translated_441_residues
MLPQRRRGALEKVRAWLTQALESERLIDMDARFLFEGGVVSLLADGWRPGHEYLFGPAMECFGWRNDRGRLAAFGHAGAV
VASAIDELDFYDAQPKKVRTAQRDLIRRLRDGRRPRTGFLLRQLPGALHLRRLFPHWLHVITAVGNVEQWSEWADAVPRW
RRWLTYAPSRAPGPACAPSSVSRSPGRIGNGWIIFAVLVVCTLLRMCLQNTSLPASPSPPAPVHGSLPSGAGASGASTGL
PPREPVGAVPPSLSARPVPVKPLQPVYPAEARRRGLEGRVVVSAAIGVTGQTRDVSIAQSSGHRELDESALAAVRNATFH
PARDSQGHAVDARYRIPFRFELSDKPAADASAGPRAHAQRIRDAFQPQIVLPEGLSGNPAAELRLRLSAQGAIESYRLVQ
PSGSKAWDDAVLRAAARVKRVPADDEGQFPPEMVITFRPRP
>Mature_441_residues
MLPQRRRGALEKVRAWLTQALESERLIDMDARFLFEGGVVSLLADGWRPGHEYLFGPAMECFGWRNDRGRLAAFGHAGAV
VASAIDELDFYDAQPKKVRTAQRDLIRRLRDGRRPRTGFLLRQLPGALHLRRLFPHWLHVITAVGNVEQWSEWADAVPRW
RRWLTYAPSRAPGPACAPSSVSRSPGRIGNGWIIFAVLVVCTLLRMCLQNTSLPASPSPPAPVHGSLPSGAGASGASTGL
PPREPVGAVPPSLSARPVPVKPLQPVYPAEARRRGLEGRVVVSAAIGVTGQTRDVSIAQSSGHRELDESALAAVRNATFH
PARDSQGHAVDARYRIPFRFELSDKPAADASAGPRAHAQRIRDAFQPQIVLPEGLSGNPAAELRLRLSAQGAIESYRLVQ
PSGSKAWDDAVLRAAARVKRVPADDEGQFPPEMVITFRPRP

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48122; Mature: 48122

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQRRRGALEKVRAWLTQALESERLIDMDARFLFEGGVVSLLADGWRPGHEYLFGPAME
CCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCHHHHHHCCCCCCHHHHHCCHHH
CFGWRNDRGRLAAFGHAGAVVASAIDELDFYDAQPKKVRTAQRDLIRRLRDGRRPRTGFL
HCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
LRQLPGALHLRRLFPHWLHVITAVGNVEQWSEWADAVPRWRRWLTYAPSRAPGPACAPSS
HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VSRSPGRIGNGWIIFAVLVVCTLLRMCLQNTSLPASPSPPAPVHGSLPSGAGASGASTGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPREPVGAVPPSLSARPVPVKPLQPVYPAEARRRGLEGRVVVSAAIGVTGQTRDVSIAQS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEECC
SGHRELDESALAAVRNATFHPARDSQGHAVDARYRIPFRFELSDKPAADASAGPRAHAQR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEECEEEECCEEEECCCCCCCCCCCCCHHHHHH
IRDAFQPQIVLPEGLSGNPAAELRLRLSAQGAIESYRLVQPSGSKAWDDAVLRAAARVKR
HHHHCCCEEECCCCCCCCCHHHEEEEECCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHC
VPADDEGQFPPEMVITFRPRP
CCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MLPQRRRGALEKVRAWLTQALESERLIDMDARFLFEGGVVSLLADGWRPGHEYLFGPAME
CCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCHHHHHHCCCCCCHHHHHCCHHH
CFGWRNDRGRLAAFGHAGAVVASAIDELDFYDAQPKKVRTAQRDLIRRLRDGRRPRTGFL
HCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
LRQLPGALHLRRLFPHWLHVITAVGNVEQWSEWADAVPRWRRWLTYAPSRAPGPACAPSS
HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VSRSPGRIGNGWIIFAVLVVCTLLRMCLQNTSLPASPSPPAPVHGSLPSGAGASGASTGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPREPVGAVPPSLSARPVPVKPLQPVYPAEARRRGLEGRVVVSAAIGVTGQTRDVSIAQS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEECC
SGHRELDESALAAVRNATFHPARDSQGHAVDARYRIPFRFELSDKPAADASAGPRAHAQR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEECEEEECCEEEECCCCCCCCCCCCCHHHHHH
IRDAFQPQIVLPEGLSGNPAAELRLRLSAQGAIESYRLVQPSGSKAWDDAVLRAAARVKR
HHHHCCCEEECCCCCCCCCHHHEEEEECCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHC
VPADDEGQFPPEMVITFRPRP
CCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA