Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612868
Identifier: 120612868
GI number: 120612868
Start: 4689247
End: 4689948
Strand: Direct
Name: 120612868
Synonym: Aave_4232
Alternate gene names: NA
Gene position: 4689247-4689948 (Clockwise)
Preceding gene: 120612867
Following gene: 120612869
Centisome position: 87.6
GC content: 75.07
Gene sequence:
>702_bases ATGAACGCCACCACCGCCGGGCTGCCCCGGCTCTTCCGCAGCCTCGGGCTGCTGCTGGCCGCCGCCGTGCTGGCCGGCTG CGCCACCACCCGCACGGTGGACAGCACCGTGTCCACCTATTCCACCCTGCCGGGGCTGCCCTCCCCGCCCACCTATCGCC TGGAACGCCTGCCCTCGCAGCAGGCCCAGGCCGCGCAGTTCGCGCCCATCGAGGCGCTGGCCCAGCAGTCGCTCGCGCGC GTGGGACTGCAGCGCGACGACGCCAACGCCCGGCTGGTGCTGCAGATCGGCGCCAGCGCCAGCACCACCTGGCCCGCCTC CTGGCCCTACTACGGCCCCGCCTATCCCGGCTGGGGATGGGGGCTGGGCTGGGGCGGCCGCGGCGGATGGGGGCTGGGCA TGGGCACCGGCTGGATGATGGACCGCCCGCCCACGCTCTACCGCCGCGAGGCCAGCCTGGTTCTGCGCGACGCGGGCACG CAGAAGATCCTCTACGAAACATCGGCCGTCTATGAGGATGTCTGGGTGAACGATCCGGCCATCTTCGGCATCCTGTTCGA TGCCGCGCTCACCGGATTCCCGGCGCCCCCCGCCGGGCCGCGCCAGGTGCGCACCACGTTCGCGCCGGCGGGCGCGGGCC CCGCGACCGCCGCCCCGGCCGCCACCACGCCCGCCACGCCGGGAGTGGTCGTGGCCCCCTGA
Upstream 100 bases:
>100_bases CCTGCCGGGCCTGCAGGTGGTGCAGATTTCCTGACACGCCGCGGCCCTCCGAGCGACCCGTGAAGCCCTCCCCTTCGTAC CGGATTCCAGGAGACCGCCC
Downstream 100 bases:
>100_bases ACCGGGGCAGTCCCGTCACCGCATGCAGCAAGCCACCCGCATCATCGCCATCCGCCATGGAGAGACCGCCTGGAACGTGG ACACGCGCATCCAGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNATTAGLPRLFRSLGLLLAAAVLAGCATTRTVDSTVSTYSTLPGLPSPPTYRLERLPSQQAQAAQFAPIEALAQQSLAR VGLQRDDANARLVLQIGASASTTWPASWPYYGPAYPGWGWGLGWGGRGGWGLGMGTGWMMDRPPTLYRREASLVLRDAGT QKILYETSAVYEDVWVNDPAIFGILFDAALTGFPAPPAGPRQVRTTFAPAGAGPATAAPAATTPATPGVVVAP
Sequences:
>Translated_233_residues MNATTAGLPRLFRSLGLLLAAAVLAGCATTRTVDSTVSTYSTLPGLPSPPTYRLERLPSQQAQAAQFAPIEALAQQSLAR VGLQRDDANARLVLQIGASASTTWPASWPYYGPAYPGWGWGLGWGGRGGWGLGMGTGWMMDRPPTLYRREASLVLRDAGT QKILYETSAVYEDVWVNDPAIFGILFDAALTGFPAPPAGPRQVRTTFAPAGAGPATAAPAATTPATPGVVVAP >Mature_233_residues MNATTAGLPRLFRSLGLLLAAAVLAGCATTRTVDSTVSTYSTLPGLPSPPTYRLERLPSQQAQAAQFAPIEALAQQSLAR VGLQRDDANARLVLQIGASASTTWPASWPYYGPAYPGWGWGLGWGGRGGWGLGMGTGWMMDRPPTLYRREASLVLRDAGT QKILYETSAVYEDVWVNDPAIFGILFDAALTGFPAPPAGPRQVRTTFAPAGAGPATAAPAATTPATPGVVVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24340; Mature: 24340
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATTAGLPRLFRSLGLLLAAAVLAGCATTRTVDSTVSTYSTLPGLPSPPTYRLERLPSQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCH QAQAAQFAPIEALAQQSLARVGLQRDDANARLVLQIGASASTTWPASWPYYGPAYPGWGW HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GLGWGGRGGWGLGMGTGWMMDRPPTLYRREASLVLRDAGTQKILYETSAVYEDVWVNDPA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCEEEHHHHHHHHHHCCCCCH IFGILFDAALTGFPAPPAGPRQVRTTFAPAGAGPATAAPAATTPATPGVVVAP HHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MNATTAGLPRLFRSLGLLLAAAVLAGCATTRTVDSTVSTYSTLPGLPSPPTYRLERLPSQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCH QAQAAQFAPIEALAQQSLARVGLQRDDANARLVLQIGASASTTWPASWPYYGPAYPGWGW HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GLGWGGRGGWGLGMGTGWMMDRPPTLYRREASLVLRDAGTQKILYETSAVYEDVWVNDPA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCEEEHHHHHHHHHHCCCCCH IFGILFDAALTGFPAPPAGPRQVRTTFAPAGAGPATAAPAATTPATPGVVVAP HHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA