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The map label for this gene is 120612853

Identifier: 120612853

GI number: 120612853

Start: 4674302

End: 4674748

Strand: Direct

Name: 120612853

Synonym: Aave_4217

Alternate gene names: NA

Gene position: 4674302-4674748 (Clockwise)

Preceding gene: 120612852

Following gene: 120612854

Centisome position: 87.32

GC content: 59.06

Gene sequence:

>447_bases
ATGACAACGCCCCTGCTCCCCCAGCTGAACCACATTGGCCTGACAGTCCACAGCATCGCGGACACGATTGCCTTCTATCG
ACAGATCACCACGGTCGAAATCTACGAGGAGCCGGTCCACATCAGCGGCGACGGAGTGGGGCAGATCATTCGGGTCGAGA
AGCCGGATTACCACTCGTGCATGGCCCGCATAGGCCAGCGCAATTTCGAACTCATCGAACACCACTCCTCCAAGGGTCGG
CATCTCCTGGCATCCCACAGCGACGTCTGCGGCATCCATCTCGCGTTCATGGTCGAGGACATCGAAGGCGTTTTCCAACG
GGTGAAGGCGCTGGGCATCGATCCCACCACGCCGGAGCCCTACACGGCCCACGAACTGGGAGGCTACAAGGCATTTTTCT
TCCGGGACCTCAATGGTGTCCAGGTCGAAATCGGACAAGTCCACTAA

Upstream 100 bases:

>100_bases
TGCTGAGCGCCATCGAGGAACGCTTCGGAGTGCGCATCCGGTTCTCGGAGTTCCTCGATAACCCCACGCCCCATTTTCTG
TACAACGCGATACCTCATCC

Downstream 100 bases:

>100_bases
CCCCCACGGAATCAACATGCAAGTCATCCAATGCTCCCTGGAACAGCTCGATGTTCTGGCAGGCCTGTTCAACGACTATC
GGATCTTCTACGAACAGGAA

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: Methylmalonyl-CoA Epimerase

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTPLLPQLNHIGLTVHSIADTIAFYRQITTVEIYEEPVHISGDGVGQIIRVEKPDYHSCMARIGQRNFELIEHHSSKGR
HLLASHSDVCGIHLAFMVEDIEGVFQRVKALGIDPTTPEPYTAHELGGYKAFFFRDLNGVQVEIGQVH

Sequences:

>Translated_148_residues
MTTPLLPQLNHIGLTVHSIADTIAFYRQITTVEIYEEPVHISGDGVGQIIRVEKPDYHSCMARIGQRNFELIEHHSSKGR
HLLASHSDVCGIHLAFMVEDIEGVFQRVKALGIDPTTPEPYTAHELGGYKAFFFRDLNGVQVEIGQVH
>Mature_147_residues
TTPLLPQLNHIGLTVHSIADTIAFYRQITTVEIYEEPVHISGDGVGQIIRVEKPDYHSCMARIGQRNFELIEHHSSKGRH
LLASHSDVCGIHLAFMVEDIEGVFQRVKALGIDPTTPEPYTAHELGGYKAFFFRDLNGVQVEIGQVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16572; Mature: 16441

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPLLPQLNHIGLTVHSIADTIAFYRQITTVEIYEEPVHISGDGVGQIIRVEKPDYHSC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCEEEEEECCCCHHHH
MARIGQRNFELIEHHSSKGRHLLASHSDVCGIHLAFMVEDIEGVFQRVKALGIDPTTPEP
HHHHCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YTAHELGGYKAFFFRDLNGVQVEIGQVH
CCHHHCCCEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
TTPLLPQLNHIGLTVHSIADTIAFYRQITTVEIYEEPVHISGDGVGQIIRVEKPDYHSC
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCEEEEEECCCCHHHH
MARIGQRNFELIEHHSSKGRHLLASHSDVCGIHLAFMVEDIEGVFQRVKALGIDPTTPEP
HHHHCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YTAHELGGYKAFFFRDLNGVQVEIGQVH
CCHHHCCCEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA