Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612794
Identifier: 120612794
GI number: 120612794
Start: 4610571
End: 4611017
Strand: Reverse
Name: 120612794
Synonym: Aave_4157
Alternate gene names: NA
Gene position: 4611017-4610571 (Counterclockwise)
Preceding gene: 120612795
Following gene: 120612793
Centisome position: 86.14
GC content: 68.23
Gene sequence:
>447_bases ATGCGGCGCGAGCGCGGCTTCACGCTGGTTGAGTTGCTGGTCGTCTTCGCCATCATGGCGCTCGTGGTGGGCCTTGCGCC CTTCGCATTCGAGCGCCTGCGCGAAGCCTCGTCCTACCGCGACGCCGTCCGCACCATGTCCAGCCAGATGCGCTCGGCCC GCTTCCAGGCCATGGCCGAAGGGCGTGAAGTGCTCTTTTCGGTCGATCTCCGCAACCGTCTCTACGGGGTGGATGCTGCC TTGAAGCCTTTGCCCGAGCCGCTGCAGATGCGGGCCATCGTGGCCCGCTCGGAACTGGATCCGCAAAGCCGGGCATCCAT CCGCTTCCTGCCCAGTGGAGGCGCCACGGGGGGCAGCATCGAGATCCTCCGGGCGCCCGGCGTAGGCACGCGCCTGCGGG TGGACTGGCTTTCCGGCCGGGTGACGCAAGAGGCGCTGACCCGATGA
Upstream 100 bases:
>100_bases AGATCCTCTCGCTGGGCTCGGACGGCGCACCGGGCGGTGAAGGCGAAGCGGCCGACATCCGCAACAAGCCCTGACGTTTC CGGTTTCCTGCCGTTTGGCC
Downstream 100 bases:
>100_bases CCGGGCGCAGGCATCGCGGCCAGCAGGGGCTCACCCTGCTGGAGTTGCTGGTGGCGTTCGCCATCATGGCGCTCGCCCTG GGCATGCTCTATCGCGCCAT
Product: general secretion pathway protein H
Products: NA
Alternate protein names: General Secretion Protein H
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRRERGFTLVELLVVFAIMALVVGLAPFAFERLREASSYRDAVRTMSSQMRSARFQAMAEGREVLFSVDLRNRLYGVDAA LKPLPEPLQMRAIVARSELDPQSRASIRFLPSGGATGGSIEILRAPGVGTRLRVDWLSGRVTQEALTR
Sequences:
>Translated_148_residues MRRERGFTLVELLVVFAIMALVVGLAPFAFERLREASSYRDAVRTMSSQMRSARFQAMAEGREVLFSVDLRNRLYGVDAA LKPLPEPLQMRAIVARSELDPQSRASIRFLPSGGATGGSIEILRAPGVGTRLRVDWLSGRVTQEALTR >Mature_148_residues MRRERGFTLVELLVVFAIMALVVGLAPFAFERLREASSYRDAVRTMSSQMRSARFQAMAEGREVLFSVDLRNRLYGVDAA LKPLPEPLQMRAIVARSELDPQSRASIRFLPSGGATGGSIEILRAPGVGTRLRVDWLSGRVTQEALTR
Specific function: Unknown
COG id: COG4970
COG function: function code NU; Tfp pilus assembly protein FimT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16436; Mature: 16436
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRERGFTLVELLVVFAIMALVVGLAPFAFERLREASSYRDAVRTMSSQMRSARFQAMAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GREVLFSVDLRNRLYGVDAALKPLPEPLQMRAIVARSELDPQSRASIRFLPSGGATGGSI CCCEEEEEEHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCE EILRAPGVGTRLRVDWLSGRVTQEALTR EEEECCCCCCEEEEEHHCCHHHHHHHCC >Mature Secondary Structure MRRERGFTLVELLVVFAIMALVVGLAPFAFERLREASSYRDAVRTMSSQMRSARFQAMAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GREVLFSVDLRNRLYGVDAALKPLPEPLQMRAIVARSELDPQSRASIRFLPSGGATGGSI CCCEEEEEEHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCE EILRAPGVGTRLRVDWLSGRVTQEALTR EEEECCCCCCEEEEEHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA