Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612766
Identifier: 120612766
GI number: 120612766
Start: 4582722
End: 4582991
Strand: Direct
Name: 120612766
Synonym: Aave_4129
Alternate gene names: NA
Gene position: 4582722-4582991 (Clockwise)
Preceding gene: 120612765
Following gene: 120612767
Centisome position: 85.61
GC content: 65.19
Gene sequence:
>270_bases ATGAGCCGCACGCCCCCTAAATCCGTGCCCATGGCCTGCTTGACCATCGGCCACTACCACTACCTGCTGCCAGCCGCGAA GGCGATCAAGGCCGCGGAAATCTTGCAGGACGCCTTCGACTGCGAGCACCACTACGACGACGGGGATTTCGTCTACGAAG TTGCCTCGACACAGCCGCGCGTGTCGTTCGCGCTGGTGCGCGCCAACCAACCGCGCATGCCGCCGGGCGGGCTCATGCCC GACCCGAGCAAGCCCCTGCGTCTGAAATGA
Upstream 100 bases:
>100_bases ACCTCGATCAGTTCTGCGTCAACGAACTGCAGGCCCTGGCAGACGCCGCGGAGGCCACCGCAGTAACCCTGCTGGATGAC GATTCTTCGAAGGAGCTGTG
Downstream 100 bases:
>100_bases AGCAGGGCTGTACGAGGACCGTATGAGCAAGAAGCAACACGCCGCATGGCTGGTTTACGAGGAGCGCGAGGTTTACGACG GGGGTATGGTCCCTCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSRTPPKSVPMACLTIGHYHYLLPAAKAIKAAEILQDAFDCEHHYDDGDFVYEVASTQPRVSFALVRANQPRMPPGGLMP DPSKPLRLK
Sequences:
>Translated_89_residues MSRTPPKSVPMACLTIGHYHYLLPAAKAIKAAEILQDAFDCEHHYDDGDFVYEVASTQPRVSFALVRANQPRMPPGGLMP DPSKPLRLK >Mature_88_residues SRTPPKSVPMACLTIGHYHYLLPAAKAIKAAEILQDAFDCEHHYDDGDFVYEVASTQPRVSFALVRANQPRMPPGGLMPD PSKPLRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9877; Mature: 9745
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTPPKSVPMACLTIGHYHYLLPAAKAIKAAEILQDAFDCEHHYDDGDFVYEVASTQPR CCCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC VSFALVRANQPRMPPGGLMPDPSKPLRLK EEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRTPPKSVPMACLTIGHYHYLLPAAKAIKAAEILQDAFDCEHHYDDGDFVYEVASTQPR CCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC VSFALVRANQPRMPPGGLMPDPSKPLRLK EEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA