Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612747
Identifier: 120612747
GI number: 120612747
Start: 4568376
End: 4570046
Strand: Reverse
Name: 120612747
Synonym: Aave_4110
Alternate gene names: NA
Gene position: 4570046-4568376 (Counterclockwise)
Preceding gene: 120612748
Following gene: 120612746
Centisome position: 85.38
GC content: 66.67
Gene sequence:
>1671_bases ATGGCGAAGAGCCCCAAGCAATTCCTGGCTGACCTGGCGTCGCTCGCCGATGGCCTGCGCCGCCAGATCGACGCAAACCT CGACGGCTGGGACATGAGCCCCGAGGCCATCGCCGATCGGCGCCGCAAGGTCTGCGATCCGGTGAGCGGCTACGAATACT GGGACCGCAACTACTTCCCGCACTACGGCCGCGCCGAGCCCAGCGCGCTGCACCTCTACCTCTACAAGCGCCTGCCCGAG ATCATCGCGAGCAATTCGGGCCAGCGCGATGCGCTGGCCGCGCCCCGCGGCGAGGCGAAGTCCACGAAGATCAGCATGAG CTTCGTGGCCTGGTGCGTGGTCACGGAAAAGCTCTGGTATCCGATCATCGTGATGGACGCCTTCGAGCAGGCGGCGGAAA TGCTGGAGGCCATCAAGGCGGAGCTGGAGGCCAACCCGCGCATCGCGGGCGACTTCCCCGAGGCGTGCGGTCAGGGCCGC GTCTGGCGAGCGGGCGTCATCGTCACACGCAACGGCCGCAAGGTGGAAGCCTTCGGCTCGGCCAAGAAGATCCGGGGCCG CCGCCATGGTGCCCATCGCCCCGACCTGGCCGTGATGGATGACATCGAGAACGATGAGAACGTCACCACGCCGGCCCAGC GCGACAAGCTGCAGAAGTTCGTCACCGCGAGCGTGCTCAACCTGGGGCCGCCGGACGATTCGATGCACGCCATACTGGTG GGCACGGTGCTGCACTACGACTCGGTGCTCGCGCGGTTTCTGAAGAATCCGCTGTGGAACAAGAAGGTGTTCAAGGCCGT GATCAACTGGCCCGAGAACATGCACCTGTGGGAGCAGTTCGAGGGGCTGCTGCTGGGCGCTGACACGCCGCAGCGCGGCG AGGCCGAAGCCATGGCGCTGTACCGCCAGCACCAGGCAGAGATGGACAAGGGCGCGGTGGTGAGCTGGCCCGCGCTGCGC CCGCTGGTCAAGCTGATGATCCGCCGTGCGCGCGAAGGGCACGCAGCCTTCGACAGCGAGCAGCAGAACGATCCGGTGGC CGGCGAGGATGCTCCGTTCGCCAACAGCATCCGCTTCTGGGTCAACCGCGCGGCCGAGTGGGTCTTCTACGGTGCCTGCG ATCCCAGCTTGGGAAGGGCAGGGAACAGCCGCGATCCGAGTGCGATTGGCGTGGGCGGCTACAACCGGGAAACGGGCGTG CTGGATGTGGTCGAGGCAGCCATCAAGAAGCGCGTGCCCGACCGGATCATCAGCGATGTGATCGAGATGCAGCGCGAGTA CGGCTGCGTCGTGTGGGGCTTCGAGTCCGTCCAGTTCCAGGAATTCCTGCGCACCGAGCTGGTCAAGCGCAGCGCGCTGC TCGGGGTGCCCGTGCCGGCGCGAGGCCTGATTCCCATCAGCGACAAGCTGCTGCGCATCGAGAGCCTGCAGCCGCACATG CACAACGGCTTGCTCCGGTTGCACAGCAGCCAGACCACGCTGATCGATCAGTTCCGCCACTTCCCCAAGGCCGATCACGA CGACGGCCCCGACATGGTCCAGATGCTGTGGATGCTGGCCGTGACGGGTGGCATGGCTGCAGCCGCTCAGGGCGGCAGCT CCCGCCAACCCCAATCCGCGCGAGAGCGCTACGCGCGCCAGGCGGCGCGCATGTTCCGGAAGCAACGATGA
Upstream 100 bases:
>100_bases CGCTTCGTCACGTTCGCACAGGCGCGTTTCCCGCAGCACCTGCAGGCCGTGGCCGAGATGCTGGAGCCCTTCGGCGAAGA ACTCGCGAAGGTGCGCTGAC
Downstream 100 bases:
>100_bases CCGAAGAGCAACATACCCTGCTGATCATCCGCGGCACGATCGCAGGCCTGCCCGAAGCCGACCGCCAGGGCGTGGAGCTG GCCGCTGCCAAGCTGCGCGA
Product: phage protein
Products: NA
Alternate protein names: Phage Protein; Phage Protein C-Terminal
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIADRRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPE IIASNSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGR VWRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV GTVLHYDSVLARFLKNPLWNKKVFKAVINWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALR PLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWVFYGACDPSLGRAGNSRDPSAIGVGGYNRETGV LDVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERYARQAARMFRKQR
Sequences:
>Translated_556_residues MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIADRRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPE IIASNSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGR VWRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV GTVLHYDSVLARFLKNPLWNKKVFKAVINWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALR PLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWVFYGACDPSLGRAGNSRDPSAIGVGGYNRETGV LDVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERYARQAARMFRKQR >Mature_555_residues AKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIADRRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPEI IASNSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRV WRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILVG TVLHYDSVLARFLKNPLWNKKVFKAVINWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALRP LVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWVFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVL DVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHMH NGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERYARQAARMFRKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62361; Mature: 62230
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIADRRRKVCDPVSGYEYWDRNYFP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCC HYGRAEPSALHLYLYKRLPEIIASNSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH PIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRVWRAGVIVTRNGRKVEAFGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCC AKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GTVLHYDSVLARFLKNPLWNKKVFKAVINWPENMHLWEQFEGLLLGADTPQRGEAEAMAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHHH YRQHQAEMDKGAVVSWPALRPLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFW HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VNRAAEWVFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVLDVVEAAIKKRVPDRIISDV HHHHCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHH IEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHH HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSA HCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHH RERYARQAARMFRKQR HHHHHHHHHHHHHHCC >Mature Secondary Structure AKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIADRRRKVCDPVSGYEYWDRNYFP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCC HYGRAEPSALHLYLYKRLPEIIASNSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH PIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRVWRAGVIVTRNGRKVEAFGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCC AKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GTVLHYDSVLARFLKNPLWNKKVFKAVINWPENMHLWEQFEGLLLGADTPQRGEAEAMAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHHH YRQHQAEMDKGAVVSWPALRPLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFW HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VNRAAEWVFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVLDVVEAAIKKRVPDRIISDV HHHHCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHH IEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHH HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSA HCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHH RERYARQAARMFRKQR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA