Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612733
Identifier: 120612733
GI number: 120612733
Start: 4549026
End: 4550201
Strand: Reverse
Name: 120612733
Synonym: Aave_4096
Alternate gene names: NA
Gene position: 4550201-4549026 (Counterclockwise)
Preceding gene: 120612734
Following gene: 120612732
Centisome position: 85.01
GC content: 68.54
Gene sequence:
>1176_bases ATGATCTATTCCTACGATTCTTCGATGGCCGGAGCGCCGGTTCTCTCTGGTGTGGCCGGGGCAATGCGCTCGGTCATCAA GGCCTGCCTGGTCGATGGCTTCGGAGCTGGGGCCGTGTCTTCCCTCAACGTGAGCAGCGGCGTGGCCACGGCCAAGTTTG CCGCGGCCCATCCCTATAGGATCGGGACGGTGGTCCAGATTGCTGGCGCCACGCCGGCGGCCCTGAACGGGCAGCAGCGC GTGCTGTCGGTGGCATCGGACTCGATCACGTTCGCCGCTGCTGGTGTCGTGGACGGTGCAGCGTCAGGGACGATCACCCA CAAGGTGGCCGCCGCCGGCTGGCAAGAGCTGTTCGTGGGCCAGCTGGCTGACACCATCGTCCTGCAGCCCACTGTGCCCG AGGCCACTGGGTGTGTGCTGCGCATCAACGACACGGGCAGCACGACGGCGCGCGTGGTGGGCTACGAGTCGGCGAGCGAT ATCAACACCGGGACCGGGCCTTTCCCCACCGCTGCGCAGGTAGGCGGTGGGCTGTACTGGCCCAAGAGCGGCACCGCATC GTCCGCTGCCCGTACGTGGCGCTGCATCGCAAGCAGCAGGTGGCTCCTGCTCTGGATCGCCCCGATGGACGGCGCGACCC ATGGTTGCCTCTTCGCGTTCGGCGACGTGCTGTCCTACCGCAGCGCCGACGCGTACGGTTGCGCGCTCTTCGGCGCCGCC TCCGCTGATGTGACCACCACGCCGGCGCCGGTCGGTGGTTGCCTCGGATACGGGCATGCCGGGGCATCGGGCAGCGGTGA TGTCTTCGTGGCCCGCGCTGCCACCGCGCTGGGCGGCGCGATCGCGGCCAAGAAGGTCGCGGCCCACAACATCACGCAAG GCTACAGCGGGACGTCCGGCTACAACTCCAACAGCTACGCGTACCCGTCTCCCGTGGACTTCGGCCTGCGCCTCGCACCG GTCGAAATTGCCGCCGGCACCGCGCTGCGAGGCCGCCTGCCTGGCGTCTATCACTGCGCGCAGGTACTGGGCGATGCCTT CAACTCGGGGGACACGGTCGCGGGAGAGGGCGCATTCGCTGGCCGCACGCTGCTCGCGCTGCGGTGCGGCGCACCGAGTG CTGGCCTGTCCCTGGCTGGCACCGTGTTTATCGACCTGACAGGTCCGTGGGAGTAA
Upstream 100 bases:
>100_bases TGCAGCCCAGCGAAGCCGTGGGCACCGACTACGCCTTTGAGGTCACCGCCCGCGGCGACGTCGATCGCGCACCTACCAAC CCCGTCATCTGATCCGCACC
Downstream 100 bases:
>100_bases GCGCATGGCAGCTCGCTACTGGCGCGTGATCGGACTGCGCACGGACGGCGCAACCGGCGTGGCGATCACGCAGGCTGCCT TGTGGGGCGCCACGGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MIYSYDSSMAGAPVLSGVAGAMRSVIKACLVDGFGAGAVSSLNVSSGVATAKFAAAHPYRIGTVVQIAGATPAALNGQQR VLSVASDSITFAAAGVVDGAASGTITHKVAAAGWQELFVGQLADTIVLQPTVPEATGCVLRINDTGSTTARVVGYESASD INTGTGPFPTAAQVGGGLYWPKSGTASSAARTWRCIASSRWLLLWIAPMDGATHGCLFAFGDVLSYRSADAYGCALFGAA SADVTTTPAPVGGCLGYGHAGASGSGDVFVARAATALGGAIAAKKVAAHNITQGYSGTSGYNSNSYAYPSPVDFGLRLAP VEIAAGTALRGRLPGVYHCAQVLGDAFNSGDTVAGEGAFAGRTLLALRCGAPSAGLSLAGTVFIDLTGPWE
Sequences:
>Translated_391_residues MIYSYDSSMAGAPVLSGVAGAMRSVIKACLVDGFGAGAVSSLNVSSGVATAKFAAAHPYRIGTVVQIAGATPAALNGQQR VLSVASDSITFAAAGVVDGAASGTITHKVAAAGWQELFVGQLADTIVLQPTVPEATGCVLRINDTGSTTARVVGYESASD INTGTGPFPTAAQVGGGLYWPKSGTASSAARTWRCIASSRWLLLWIAPMDGATHGCLFAFGDVLSYRSADAYGCALFGAA SADVTTTPAPVGGCLGYGHAGASGSGDVFVARAATALGGAIAAKKVAAHNITQGYSGTSGYNSNSYAYPSPVDFGLRLAP VEIAAGTALRGRLPGVYHCAQVLGDAFNSGDTVAGEGAFAGRTLLALRCGAPSAGLSLAGTVFIDLTGPWE >Mature_391_residues MIYSYDSSMAGAPVLSGVAGAMRSVIKACLVDGFGAGAVSSLNVSSGVATAKFAAAHPYRIGTVVQIAGATPAALNGQQR VLSVASDSITFAAAGVVDGAASGTITHKVAAAGWQELFVGQLADTIVLQPTVPEATGCVLRINDTGSTTARVVGYESASD INTGTGPFPTAAQVGGGLYWPKSGTASSAARTWRCIASSRWLLLWIAPMDGATHGCLFAFGDVLSYRSADAYGCALFGAA SADVTTTPAPVGGCLGYGHAGASGSGDVFVARAATALGGAIAAKKVAAHNITQGYSGTSGYNSNSYAYPSPVDFGLRLAP VEIAAGTALRGRLPGVYHCAQVLGDAFNSGDTVAGEGAFAGRTLLALRCGAPSAGLSLAGTVFIDLTGPWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38987; Mature: 38987
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSYDSSMAGAPVLSGVAGAMRSVIKACLVDGFGAGAVSSLNVSSGVATAKFAAAHPYR CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCEE IGTVVQIAGATPAALNGQQRVLSVASDSITFAAAGVVDGAASGTITHKVAAAGWQELFVG CCEEEEECCCCCHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHH QLADTIVLQPTVPEATGCVLRINDTGSTTARVVGYESASDINTGTGPFPTAAQVGGGLYW HHHCEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEC PKSGTASSAARTWRCIASSRWLLLWIAPMDGATHGCLFAFGDVLSYRSADAYGCALFGAA CCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC SADVTTTPAPVGGCLGYGHAGASGSGDVFVARAATALGGAIAAKKVAAHNITQGYSGTSG CCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC YNSNSYAYPSPVDFGLRLAPVEIAAGTALRGRLPGVYHCAQVLGDAFNSGDTVAGEGAFA CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GRTLLALRCGAPSAGLSLAGTVFIDLTGPWE CCEEEEEECCCCCCCCEEEEEEEEEECCCCC >Mature Secondary Structure MIYSYDSSMAGAPVLSGVAGAMRSVIKACLVDGFGAGAVSSLNVSSGVATAKFAAAHPYR CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCEE IGTVVQIAGATPAALNGQQRVLSVASDSITFAAAGVVDGAASGTITHKVAAAGWQELFVG CCEEEEECCCCCHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHH QLADTIVLQPTVPEATGCVLRINDTGSTTARVVGYESASDINTGTGPFPTAAQVGGGLYW HHHCEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEC PKSGTASSAARTWRCIASSRWLLLWIAPMDGATHGCLFAFGDVLSYRSADAYGCALFGAA CCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC SADVTTTPAPVGGCLGYGHAGASGSGDVFVARAATALGGAIAAKKVAAHNITQGYSGTSG CCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC YNSNSYAYPSPVDFGLRLAPVEIAAGTALRGRLPGVYHCAQVLGDAFNSGDTVAGEGAFA CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GRTLLALRCGAPSAGLSLAGTVFIDLTGPWE CCEEEEEECCCCCCCCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA