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The map label for this gene is yhiR [H]

Identifier: 120612692

GI number: 120612692

Start: 4505947

End: 4506846

Strand: Direct

Name: yhiR [H]

Synonym: Aave_4055

Alternate gene names: 120612692

Gene position: 4505947-4506846 (Clockwise)

Preceding gene: 120612684

Following gene: 120612698

Centisome position: 84.18

GC content: 68.33

Gene sequence:

>900_bases
ATGTTCAGCTATCGCCACGCCTTCCATGCGGGCAACCATGCCGACGTGCTCAAGCACACGGTATTGATCGCCATCCTGCA
ACACCTCACCCAGAAGGACGCCGCGCTCGCGGTGCTGGACACCCACGCTGGCGCGGGCCTCTTCCGCCTGGACGGCGATT
ACGCGGCCACGAGCGGCGAAGCGGCCGACGGCATCCTCCGCCTCCTGCGCACCGCGCTACCCGAAGGCACCCAGCTCGCC
CCGGCGCTGCAGGCCTACGTGGACCTGGTGCAGGATTTCAACACCGGCCCGGCGGCGAAAGTCTATCCGGGCTCGCCCTT
CATCGCCCACCGGCTGCTGCGTCCGCAGGACCGGCTCAAGCTGTTCGAACTGCATCCCACGGACCTGCGCTCCCTGGCTG
GCAACGTCGCGCAGCTCGACGCCGGACGCCAGGTGGCGGTGCTGCACGAAGACGGCTTCGAGGGCATCCGCAAGTTCCTG
CCCCCGCCTTCCCGGAGGGGTTTCGTGCTGTGCGATCCCAGCTATGAAATCAAGAGCGACTATGGCAGGGTTCTGGACAT
GCTGGCAGAAGCGCTCAAGCGCTTCGCCACGGGCACCTATGCCATCTGGTACCCCATCATTCCGCGGCCCGAGGCCCACG
ACCTGCCTCGGCGGATGAAGACGCTCGCCACCCGCGCGGGCAAGCCCTGGCTGCATGCCACCCTGACCGTGAAATCCAGC
AAGATGACCTCGGACGCGGACGGAACGCAGCGGCGCCCGGGCCTGCCCGCGAGCGGCATGTTCGTCGTGAACCCGCCCTA
CACGCTCAAGGCGGCGCTGCAGCCTGCCCTGCCCCAGATGGCGCAGCTGCTGGCCCAGGACGCGCAGCACGCCGCCCACA
GCCTCGAGTCAGGCGGCTGA

Upstream 100 bases:

>100_bases
TGGACGGGCAACAAAGCGCGTTCCCGGGCCAGGAAACTGCCGCGCCGCCCGGCCTCGCCCCATCGGCGGACGCGGGCGGG
GCTGGTTACCATCGGGGCCT

Downstream 100 bases:

>100_bases
GGCCGGTCACGGCGCCGCCGGGTCGTTCCGGGAACCGGGACAGGGTGCATCCGGATCCGCGGGCGCCAGGCTGATCGCCA
CCGGCTTGATGCCCAGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFSYRHAFHAGNHADVLKHTVLIAILQHLTQKDAALAVLDTHAGAGLFRLDGDYAATSGEAADGILRLLRTALPEGTQLA
PALQAYVDLVQDFNTGPAAKVYPGSPFIAHRLLRPQDRLKLFELHPTDLRSLAGNVAQLDAGRQVAVLHEDGFEGIRKFL
PPPSRRGFVLCDPSYEIKSDYGRVLDMLAEALKRFATGTYAIWYPIIPRPEAHDLPRRMKTLATRAGKPWLHATLTVKSS
KMTSDADGTQRRPGLPASGMFVVNPPYTLKAALQPALPQMAQLLAQDAQHAAHSLESGG

Sequences:

>Translated_299_residues
MFSYRHAFHAGNHADVLKHTVLIAILQHLTQKDAALAVLDTHAGAGLFRLDGDYAATSGEAADGILRLLRTALPEGTQLA
PALQAYVDLVQDFNTGPAAKVYPGSPFIAHRLLRPQDRLKLFELHPTDLRSLAGNVAQLDAGRQVAVLHEDGFEGIRKFL
PPPSRRGFVLCDPSYEIKSDYGRVLDMLAEALKRFATGTYAIWYPIIPRPEAHDLPRRMKTLATRAGKPWLHATLTVKSS
KMTSDADGTQRRPGLPASGMFVVNPPYTLKAALQPALPQMAQLLAQDAQHAAHSLESGG
>Mature_299_residues
MFSYRHAFHAGNHADVLKHTVLIAILQHLTQKDAALAVLDTHAGAGLFRLDGDYAATSGEAADGILRLLRTALPEGTQLA
PALQAYVDLVQDFNTGPAAKVYPGSPFIAHRLLRPQDRLKLFELHPTDLRSLAGNVAQLDAGRQVAVLHEDGFEGIRKFL
PPPSRRGFVLCDPSYEIKSDYGRVLDMLAEALKRFATGTYAIWYPIIPRPEAHDLPRRMKTLATRAGKPWLHATLTVKSS
KMTSDADGTQRRPGLPASGMFVVNPPYTLKAALQPALPQMAQLLAQDAQHAAHSLESGG

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=295, Percent_Identity=42.0338983050847, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32573; Mature: 32573

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYRHAFHAGNHADVLKHTVLIAILQHLTQKDAALAVLDTHAGAGLFRLDGDYAATSGE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCH
AADGILRLLRTALPEGTQLAPALQAYVDLVQDFNTGPAAKVYPGSPFIAHRLLRPQDRLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCHHHCE
LFELHPTDLRSLAGNVAQLDAGRQVAVLHEDGFEGIRKFLPPPSRRGFVLCDPSYEIKSD
EEECCCHHHHHHCCCHHEECCCCEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCHHHHH
YGRVLDMLAEALKRFATGTYAIWYPIIPRPEAHDLPRRMKTLATRAGKPWLHATLTVKSS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECC
KMTSDADGTQRRPGLPASGMFVVNPPYTLKAALQPALPQMAQLLAQDAQHAAHSLESGG
CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFSYRHAFHAGNHADVLKHTVLIAILQHLTQKDAALAVLDTHAGAGLFRLDGDYAATSGE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCH
AADGILRLLRTALPEGTQLAPALQAYVDLVQDFNTGPAAKVYPGSPFIAHRLLRPQDRLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHCCCHHHCE
LFELHPTDLRSLAGNVAQLDAGRQVAVLHEDGFEGIRKFLPPPSRRGFVLCDPSYEIKSD
EEECCCHHHHHHCCCHHEECCCCEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCHHHHH
YGRVLDMLAEALKRFATGTYAIWYPIIPRPEAHDLPRRMKTLATRAGKPWLHATLTVKSS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECC
KMTSDADGTQRRPGLPASGMFVVNPPYTLKAALQPALPQMAQLLAQDAQHAAHSLESGG
CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]