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The map label for this gene is nudF [H]

Identifier: 120612658

GI number: 120612658

Start: 4468508

End: 4469236

Strand: Reverse

Name: nudF [H]

Synonym: Aave_4021

Alternate gene names: 120612658

Gene position: 4469236-4468508 (Counterclockwise)

Preceding gene: 120612660

Following gene: 120612657

Centisome position: 83.49

GC content: 71.06

Gene sequence:

>729_bases
ATGGCCGCGCTTTCTCCTTCTTCCTCGCCCGATTCTTCCGCCGCTTTCCGGGATACCGGGTCTCCCGCCATCCTCTGCAC
GGTGGACGTGGTGCTGCTGACGCTGAGGGGCGGGGTATTGCATGCCGTGCTGCTGCGGCGGGCCGATGGGCCGCATGCGG
GCGGCTGGGCGCTGCCGGGCGGCTTCATCCACGCGCAGGAGGACGCCACGGCATGGGACGCGGCGGCCCGCGTGCTGCGC
GAGAAGACGGGCATCGCCAGTCCCTACCTGGAGCAGCTGGCGACCTATTCCGGGGCGCAGCGCGATCCGCGCGGCTGGTC
CGTCTCCATTGTCTATTGCGCGCTGGTGCCGGCGGAGCTGCTGCCGGAGGACAGCGAGCGGCTGCAGGCCGCGCCCGTGG
GCGCGCTGCCGGCGCTGGCTTTCGACCATGCGGACATGGTGGCGCTGGCGGTGTCGCGGGTGCGGTCCAAGAGCCAGTAT
TCGTCGCTGCCGGTGTATTTCTGCGGGGAGCGCATGACGCTGCCGCGGCTGCAGGCGGTGTACGAGGCGGTGCTGGGCGA
GCCGGTGAACAAGGTGAGCTTCCGCCGCAAGATCGACGAGCTGGGCATGCTGGAGCCGGTGGACGGGCTGATGGAGTCCG
GCGCGGCGCACCGGCCGGCGCAGGTGTACCGGCTGCGGGAGGAGTTCCGGCGGACCCTGTCCGTGGTGCCGCGGGGGCTG
AATAGTTGA

Upstream 100 bases:

>100_bases
TGGGCACGATTTGCCGCCGGGTGTGGTGGAGGCGGCGGACGGGTGCCGGGTGGCCGGAGTGCAGGCACACTCCGGCTGTC
GCAGCGATTTTTCGTACGCC

Downstream 100 bases:

>100_bases
AGCCTGTTCAAGGTTGTCCCCCGGTGGTGCGGGGGCGTGCCGGCCTTCCTAGAATGCGGGCACGATGTCCGCCGGCGTGT
CCCCGTCCCCTTCCTCCGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAALSPSSSPDSSAAFRDTGSPAILCTVDVVLLTLRGGVLHAVLLRRADGPHAGGWALPGGFIHAQEDATAWDAAARVLR
EKTGIASPYLEQLATYSGAQRDPRGWSVSIVYCALVPAELLPEDSERLQAAPVGALPALAFDHADMVALAVSRVRSKSQY
SSLPVYFCGERMTLPRLQAVYEAVLGEPVNKVSFRRKIDELGMLEPVDGLMESGAAHRPAQVYRLREEFRRTLSVVPRGL
NS

Sequences:

>Translated_242_residues
MAALSPSSSPDSSAAFRDTGSPAILCTVDVVLLTLRGGVLHAVLLRRADGPHAGGWALPGGFIHAQEDATAWDAAARVLR
EKTGIASPYLEQLATYSGAQRDPRGWSVSIVYCALVPAELLPEDSERLQAAPVGALPALAFDHADMVALAVSRVRSKSQY
SSLPVYFCGERMTLPRLQAVYEAVLGEPVNKVSFRRKIDELGMLEPVDGLMESGAAHRPAQVYRLREEFRRTLSVVPRGL
NS
>Mature_241_residues
AALSPSSSPDSSAAFRDTGSPAILCTVDVVLLTLRGGVLHAVLLRRADGPHAGGWALPGGFIHAQEDATAWDAAARVLRE
KTGIASPYLEQLATYSGAQRDPRGWSVSIVYCALVPAELLPEDSERLQAAPVGALPALAFDHADMVALAVSRVRSKSQYS
SLPVYFCGERMTLPRLQAVYEAVLGEPVNKVSFRRKIDELGMLEPVDGLMESGAAHRPAQVYRLREEFRRTLSVVPRGLN
S

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 26049; Mature: 25918

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALSPSSSPDSSAAFRDTGSPAILCTVDVVLLTLRGGVLHAVLLRRADGPHAGGWALPG
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
GFIHAQEDATAWDAAARVLREKTGIASPYLEQLATYSGAQRDPRGWSVSIVYCALVPAEL
CCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHH
LPEDSERLQAAPVGALPALAFDHADMVALAVSRVRSKSQYSSLPVYFCGERMTLPRLQAV
CCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
YEAVLGEPVNKVSFRRKIDELGMLEPVDGLMESGAAHRPAQVYRLREEFRRTLSVVPRGL
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NS
CC
>Mature Secondary Structure 
AALSPSSSPDSSAAFRDTGSPAILCTVDVVLLTLRGGVLHAVLLRRADGPHAGGWALPG
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
GFIHAQEDATAWDAAARVLREKTGIASPYLEQLATYSGAQRDPRGWSVSIVYCALVPAEL
CCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHH
LPEDSERLQAAPVGALPALAFDHADMVALAVSRVRSKSQYSSLPVYFCGERMTLPRLQAV
CCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
YEAVLGEPVNKVSFRRKIDELGMLEPVDGLMESGAAHRPAQVYRLREEFRRTLSVVPRGL
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]