Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612559
Identifier: 120612559
GI number: 120612559
Start: 4344232
End: 4344588
Strand: Direct
Name: 120612559
Synonym: Aave_3920
Alternate gene names: NA
Gene position: 4344232-4344588 (Clockwise)
Preceding gene: 120612558
Following gene: 120612560
Centisome position: 81.16
GC content: 75.35
Gene sequence:
>357_bases ATGAATGCATGGCTGACCGGCTGCGCCATGCTGGCCTCGCTGGCAGGCCTCCATGCCTGGGCCCGCGCCGTGCCGACGCG GGCCTGGGGCGACGGCGCGGCCAGCGCCACGACGCGGCGCGGCACCGTGGTGATGCTGGTGCTCACGCTGGCACTGCAGG TCGCGGCCACCGTGGCGGCGTTCGGCCCCGCGGCGGCCACGGCTCTCGTTCCGGCATCGTGGATGGTGACGGGCTGGGGC TTCACGCTCGCCATGAACCAGTGGCCGCACGGCAGCCGGCGCTGGGCGGGCCGGTTGGGCATGGCGGGTGTCGCGGGTTG CGCCCTGGGGCTCGCCGCGAAGGTGCTGCAGGGCTGA
Upstream 100 bases:
>100_bases GGTGGGTGGCCGCGGCCCTGTGCGCGCTGGCCGCCGTGCATGCGCTGCACGCGGCGCGGCAGCGCGGGCAGCCCGATGCC CATGCCCTGGAGGGCGCCGG
Downstream 100 bases:
>100_bases GCACGCCGGCGCCGTGCGGCCGTTCCGGCGGATTCCACGCCGTGGCACACTGTGCCACCCGCGGGACCGGCCTGCGGGAA CGCCCTGGAGAGGCCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNAWLTGCAMLASLAGLHAWARAVPTRAWGDGAASATTRRGTVVMLVLTLALQVAATVAAFGPAAATALVPASWMVTGWG FTLAMNQWPHGSRRWAGRLGMAGVAGCALGLAAKVLQG
Sequences:
>Translated_118_residues MNAWLTGCAMLASLAGLHAWARAVPTRAWGDGAASATTRRGTVVMLVLTLALQVAATVAAFGPAAATALVPASWMVTGWG FTLAMNQWPHGSRRWAGRLGMAGVAGCALGLAAKVLQG >Mature_118_residues MNAWLTGCAMLASLAGLHAWARAVPTRAWGDGAASATTRRGTVVMLVLTLALQVAATVAAFGPAAATALVPASWMVTGWG FTLAMNQWPHGSRRWAGRLGMAGVAGCALGLAAKVLQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12002; Mature: 12002
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWLTGCAMLASLAGLHAWARAVPTRAWGDGAASATTRRGTVVMLVLTLALQVAATVAA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FGPAAATALVPASWMVTGWGFTLAMNQWPHGSRRWAGRLGMAGVAGCALGLAAKVLQG HCHHHHHHHCCCHHEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNAWLTGCAMLASLAGLHAWARAVPTRAWGDGAASATTRRGTVVMLVLTLALQVAATVAA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FGPAAATALVPASWMVTGWGFTLAMNQWPHGSRRWAGRLGMAGVAGCALGLAAKVLQG HCHHHHHHHCCCHHEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA