Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612449
Identifier: 120612449
GI number: 120612449
Start: 4229915
End: 4230934
Strand: Direct
Name: 120612449
Synonym: Aave_3808
Alternate gene names: NA
Gene position: 4229915-4230934 (Clockwise)
Preceding gene: 120612448
Following gene: 120612450
Centisome position: 79.02
GC content: 68.53
Gene sequence:
>1020_bases ATGCAAGACCTCTGGCGTTGCACCCTCAAGCGCAGCACCCTCCATCTTCCGGCGACCCGCAGCCGGTTCCACGGCCTGCG GGCGCAGCAGCGGTCTCCCGCCACCGCCTACCTCCATGAACCCGGCTTCGACTACAACCTGCCTTTCGGGAGCTGGGACG ATCCACCGCCCCTGCAACTCGAGGCCATGCGCACGACGACGCCCGTGCTGCTGCACACGGCCGATCCCGAGGCCACCGCG TCGGATCTCGCGGTCGCGGCAGCACGGGCTCTGTTCGAAGGCCGCAGCGATACGGAGCGCGAGCGCATCGGCATCATCAT CTACTGCCATGCGTCCGCGAACGAGAACGTGGCGGAAGGCATCGCATGCCGCATCCAGTACGAACTGGGCGCGACCACCT CGATGGTGTTCAGTCTTTCGCAGAATCTCTGCAGCGGCCTCGTCGCCCTGCGGCTCGCCTGCGCGCTCCTGCAGGACGAG CCGAAGGGCCGCAGCGCCGTCATCGTGGCAGCGGAGAAATGGATCCACCCTTTCGTGCGCAGCTTCGGCAAGACCGCGGT CTTCGAGGACGGTTCGGCGGCGCTGCAGCTCGAGGCGGCCGGGCAGCCCGGTTGGGAGCTCGGCAGTGTCCACCATGCCG ATCTCGTCGGTACGCCGACGCCGTTCGAGGCGACGCCATCGGAGCTGCGGCAGACGCTGCTGCAGCAAGGTGTGCGGACG CTGCGGGAGATGCTCGATATCGCGGCCGTCCGCCCGCAAGACCTGGACTTCGCTCTGATGCCGCACATCGACGGCCAGCT CTGCGACCAGATACTGCAAGGCGCGGGCATGGAACATGTGTACCGGCCGCGGGACATGCGGCGCCAGGGCCACCTGGCGG CCGCCGAAAGCCTCGCCAACCTGCACAGCGCGACATGGGATGGAGCGCTGACGGGCGAGCGCAGGCTCGGCGTGCTCTGG AGCACGGGGCTGCAGGGCGAATCGGCCTGCTGCCTCGTGCGCACGGGAGGCAGGCCATGA
Upstream 100 bases:
>100_bases GGCCGGGTGCATTTCGAATTGCTGGCACCTGCACCGACCGACTCCACGGCACCGTAACCCGGCGCCTGGCATTTTTCCAA CCGAAACCAAAGGATCCTGA
Downstream 100 bases:
>100_bases ACCAGGCTTCGGGCATTTTCGGCATCGAGGCCGCCAGCCGGTATCTTCCCCAGCAGCTGCCCATCCAGGCATGGGCCCAG GCGAACCATGCGGACGCGGC
Product: 3-oxoacyl-(acyl-carrier-protein)-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MQDLWRCTLKRSTLHLPATRSRFHGLRAQQRSPATAYLHEPGFDYNLPFGSWDDPPPLQLEAMRTTTPVLLHTADPEATA SDLAVAAARALFEGRSDTERERIGIIIYCHASANENVAEGIACRIQYELGATTSMVFSLSQNLCSGLVALRLACALLQDE PKGRSAVIVAAEKWIHPFVRSFGKTAVFEDGSAALQLEAAGQPGWELGSVHHADLVGTPTPFEATPSELRQTLLQQGVRT LREMLDIAAVRPQDLDFALMPHIDGQLCDQILQGAGMEHVYRPRDMRRQGHLAAAESLANLHSATWDGALTGERRLGVLW STGLQGESACCLVRTGGRP
Sequences:
>Translated_339_residues MQDLWRCTLKRSTLHLPATRSRFHGLRAQQRSPATAYLHEPGFDYNLPFGSWDDPPPLQLEAMRTTTPVLLHTADPEATA SDLAVAAARALFEGRSDTERERIGIIIYCHASANENVAEGIACRIQYELGATTSMVFSLSQNLCSGLVALRLACALLQDE PKGRSAVIVAAEKWIHPFVRSFGKTAVFEDGSAALQLEAAGQPGWELGSVHHADLVGTPTPFEATPSELRQTLLQQGVRT LREMLDIAAVRPQDLDFALMPHIDGQLCDQILQGAGMEHVYRPRDMRRQGHLAAAESLANLHSATWDGALTGERRLGVLW STGLQGESACCLVRTGGRP >Mature_339_residues MQDLWRCTLKRSTLHLPATRSRFHGLRAQQRSPATAYLHEPGFDYNLPFGSWDDPPPLQLEAMRTTTPVLLHTADPEATA SDLAVAAARALFEGRSDTERERIGIIIYCHASANENVAEGIACRIQYELGATTSMVFSLSQNLCSGLVALRLACALLQDE PKGRSAVIVAAEKWIHPFVRSFGKTAVFEDGSAALQLEAAGQPGWELGSVHHADLVGTPTPFEATPSELRQTLLQQGVRT LREMLDIAAVRPQDLDFALMPHIDGQLCDQILQGAGMEHVYRPRDMRRQGHLAAAESLANLHSATWDGALTGERRLGVLW STGLQGESACCLVRTGGRP
Specific function: Unknown
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37007; Mature: 37007
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLWRCTLKRSTLHLPATRSRFHGLRAQQRSPATAYLHEPGFDYNLPFGSWDDPPPLQL CCCHHHHHHHCCEEECCCHHHHHHCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE EAMRTTTPVLLHTADPEATASDLAVAAARALFEGRSDTERERIGIIIYCHASANENVAEG EEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCC IACRIQYELGATTSMVFSLSQNLCSGLVALRLACALLQDEPKGRSAVIVAAEKWIHPFVR EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH SFGKTAVFEDGSAALQLEAAGQPGWELGSVHHADLVGTPTPFEATPSELRQTLLQQGVRT HHCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LREMLDIAAVRPQDLDFALMPHIDGQLCDQILQGAGMEHVYRPRDMRRQGHLAAAESLAN HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHCCCHHHHHHCCHHHHHHHHH LHSATWDGALTGERRLGVLWSTGLQGESACCLVRTGGRP HHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCC >Mature Secondary Structure MQDLWRCTLKRSTLHLPATRSRFHGLRAQQRSPATAYLHEPGFDYNLPFGSWDDPPPLQL CCCHHHHHHHCCEEECCCHHHHHHCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE EAMRTTTPVLLHTADPEATASDLAVAAARALFEGRSDTERERIGIIIYCHASANENVAEG EEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCC IACRIQYELGATTSMVFSLSQNLCSGLVALRLACALLQDEPKGRSAVIVAAEKWIHPFVR EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH SFGKTAVFEDGSAALQLEAAGQPGWELGSVHHADLVGTPTPFEATPSELRQTLLQQGVRT HHCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LREMLDIAAVRPQDLDFALMPHIDGQLCDQILQGAGMEHVYRPRDMRRQGHLAAAESLAN HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHCCCHHHHHHCCHHHHHHHHH LHSATWDGALTGERRLGVLWSTGLQGESACCLVRTGGRP HHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA