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The map label for this gene is ydiO [C]

Identifier: 120612447

GI number: 120612447

Start: 4228197

End: 4229312

Strand: Direct

Name: ydiO [C]

Synonym: Aave_3806

Alternate gene names: 120612447

Gene position: 4228197-4229312 (Clockwise)

Preceding gene: 120612446

Following gene: 120612448

Centisome position: 78.99

GC content: 69.89

Gene sequence:

>1116_bases
ATGTCCCTGGTATCCCCCGAATCCCAAACCGATCCGCGCGACTTCTCGCTGCGGTTGAGCGAAGACGAGTGCAGCATGCT
GGAACCCGTGCGCCGCTATGCGCGCGAGCGCCTGCTGCCGCTTCTCGGAGATGCCGCCTCGGCATCCGGGAGACAGGCGG
CACTGCAGCAGGCGGCCCGGCTCGGCCTGGCGAGCGCGGTGCTGCCGCAGGACTGCGACGGCCTGTGCGTGGATGCGCCG
GCCGTCTGCCTGCTGCTGGAGGAGATGGCCGCCGGGCCGCTGTGGCTGGCGGCCGAGATCACCCTGTCCGTCCCGGCGCT
CGCGATGCGCCGGGAATGCGAAAAGATGGGGTCTCTGCTGCCGGCAGATGCGGAAAACCTCTTCGGAGGAAGCGGCGCCT
TGCCGTTCGCGGTGTGCGAACCGCAGGGCGATGTGGCATTCACGCTGCTGCCCCAGGCGCCCGGCGGGCTGCTCGCGCTC
TGCCCGGGCGCACCGGATGGCGGCCACGTACTGCGGGGTTTCGGGATCGATGAGCTGGCAGGCATGCGAATGCAGGCGCA
GGCGCAGGCGCAGGCGCAATCCGGACAGGACCCTCTGCGGATGGTCCGGCTGCACATCGGTTCGGCCGCGGGACGCAGCT
CCCACGCCTTCGAACTGTCCCAGCGCCAGCTCGAGCATGGCCTGATATGGCATGGGCTGTGGCTCGCCGCACTGCTGGCC
GGAGCGGCGCGGGCCGCAACCACCTTCGCCTTCGAGTATGCGCGCACGCGCGTGGCCTTCCAGCGGCCCATCTTCCACCA
CCAGGCGGTGCTGCTGCGGCTGGCCGACATGGCGATCGCCACCGACGGGTTGCGGCTGCTGGTTCTGGACTCTGCCTCGC
GGCTGGCTGTCCAGGAGTTGACGGCGCCCCACTTCGCCGAAGCTGCGCGGCACATCGCATGTACCAGCATGGAAGTCCAC
CGCCACGCCGTGCAGATCTGCGGCGGGCATGGCTACGTGGAAGGTTTTCCCCCTGCGCGGCGCTTTCAGGACGCACAGCT
GCTCACGCTCATGCTGCTGGAAACGGCCCGCGTGGCAGCAGCACTGTCCGCCCCGACGGCATCACCGGGCCGCTGA

Upstream 100 bases:

>100_bases
GCAATCCGGCGCGTACGGGCGCAGCGCCAGCCCGGCCGCCTTCCTGAGCCATCCCGAACCTGCAGAAATCCTGGTCTGAC
ACCAGCCGAGAGGAATCACC

Downstream 100 bases:

>100_bases
GCCCACAGGTCAGGGCATACGCATGGCAGAACAGCAGTCACCTTTTTTCCTGCGCCCTCCGTCACCCGCCGATCTGGAAC
GGGTTCTGGACTGGATGCAG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSLVSPESQTDPRDFSLRLSEDECSMLEPVRRYARERLLPLLGDAASASGRQAALQQAARLGLASAVLPQDCDGLCVDAP
AVCLLLEEMAAGPLWLAAEITLSVPALAMRRECEKMGSLLPADAENLFGGSGALPFAVCEPQGDVAFTLLPQAPGGLLAL
CPGAPDGGHVLRGFGIDELAGMRMQAQAQAQAQSGQDPLRMVRLHIGSAAGRSSHAFELSQRQLEHGLIWHGLWLAALLA
GAARAATTFAFEYARTRVAFQRPIFHHQAVLLRLADMAIATDGLRLLVLDSASRLAVQELTAPHFAEAARHIACTSMEVH
RHAVQICGGHGYVEGFPPARRFQDAQLLTLMLLETARVAAALSAPTASPGR

Sequences:

>Translated_371_residues
MSLVSPESQTDPRDFSLRLSEDECSMLEPVRRYARERLLPLLGDAASASGRQAALQQAARLGLASAVLPQDCDGLCVDAP
AVCLLLEEMAAGPLWLAAEITLSVPALAMRRECEKMGSLLPADAENLFGGSGALPFAVCEPQGDVAFTLLPQAPGGLLAL
CPGAPDGGHVLRGFGIDELAGMRMQAQAQAQAQSGQDPLRMVRLHIGSAAGRSSHAFELSQRQLEHGLIWHGLWLAALLA
GAARAATTFAFEYARTRVAFQRPIFHHQAVLLRLADMAIATDGLRLLVLDSASRLAVQELTAPHFAEAARHIACTSMEVH
RHAVQICGGHGYVEGFPPARRFQDAQLLTLMLLETARVAAALSAPTASPGR
>Mature_370_residues
SLVSPESQTDPRDFSLRLSEDECSMLEPVRRYARERLLPLLGDAASASGRQAALQQAARLGLASAVLPQDCDGLCVDAPA
VCLLLEEMAAGPLWLAAEITLSVPALAMRRECEKMGSLLPADAENLFGGSGALPFAVCEPQGDVAFTLLPQAPGGLLALC
PGAPDGGHVLRGFGIDELAGMRMQAQAQAQAQSGQDPLRMVRLHIGSAAGRSSHAFELSQRQLEHGLIWHGLWLAALLAG
AARAATTFAFEYARTRVAFQRPIFHHQAVLLRLADMAIATDGLRLLVLDSASRLAVQELTAPHFAEAARHIACTSMEVHR
HAVQICGGHGYVEGFPPARRFQDAQLLTLMLLETARVAAALSAPTASPGR

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 39452; Mature: 39321

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVSPESQTDPRDFSLRLSEDECSMLEPVRRYARERLLPLLGDAASASGRQAALQQAAR
CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LGLASAVLPQDCDGLCVDAPAVCLLLEEMAAGPLWLAAEITLSVPALAMRRECEKMGSLL
HHHHHHCCCCCCCCCEECHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCC
PADAENLFGGSGALPFAVCEPQGDVAFTLLPQAPGGLLALCPGAPDGGHVLRGFGIDELA
CCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCEEECCCHHHHH
GMRMQAQAQAQAQSGQDPLRMVRLHIGSAAGRSSHAFELSQRQLEHGLIWHGLWLAALLA
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
GAARAATTFAFEYARTRVAFQRPIFHHQAVLLRLADMAIATDGLRLLVLDSASRLAVQEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
TAPHFAEAARHIACTSMEVHRHAVQICGGHGYVEGFPPARRFQDAQLLTLMLLETARVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHH
ALSAPTASPGR
HHCCCCCCCCC
>Mature Secondary Structure 
SLVSPESQTDPRDFSLRLSEDECSMLEPVRRYARERLLPLLGDAASASGRQAALQQAAR
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LGLASAVLPQDCDGLCVDAPAVCLLLEEMAAGPLWLAAEITLSVPALAMRRECEKMGSLL
HHHHHHCCCCCCCCCEECHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCC
PADAENLFGGSGALPFAVCEPQGDVAFTLLPQAPGGLLALCPGAPDGGHVLRGFGIDELA
CCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCEEECCCHHHHH
GMRMQAQAQAQAQSGQDPLRMVRLHIGSAAGRSSHAFELSQRQLEHGLIWHGLWLAALLA
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
GAARAATTFAFEYARTRVAFQRPIFHHQAVLLRLADMAIATDGLRLLVLDSASRLAVQEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
TAPHFAEAARHIACTSMEVHRHAVQICGGHGYVEGFPPARRFQDAQLLTLMLLETARVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHH
ALSAPTASPGR
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]