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The map label for this gene is rhsB [H]

Identifier: 120612435

GI number: 120612435

Start: 4217094

End: 4218167

Strand: Direct

Name: rhsB [H]

Synonym: Aave_3794

Alternate gene names: 120612435

Gene position: 4217094-4218167 (Clockwise)

Preceding gene: 120612432

Following gene: 120612436

Centisome position: 78.78

GC content: 50.84

Gene sequence:

>1074_bases
ATGCGCTGCGCGCACCGGCCCGCTTGCCGTGGACAACGCTTCGCGTTGCCCACCACGCAGACCTTCGACCACAACTACAC
AGCCTCCTACTACCTTCATGAACTCCGAACACCGGAGTCCTATCGAGGCGACAACTATTCTGACGCGGGGGGCCAGCGCG
GGGGCAAAGCCAGCCTGTTCATCTACGAGCCGGGCAGCTTCGTGCCTTTGGCCACCGTGCAGGGCACGCAGCAGCCAGGC
GACAGCCGCATCTACTGGTACCAGTGCGACCAGATCGGGGCTCCGCTGGAGTTGACTGATGCACAGGGGCACGTTGCCTG
GGCTGCGGATTACAAGGTGTGGGGCGAGGCCGCCCTAAGGAAGGTGCTTAAATCGGCTACAGGTACTGATGCCTTGCCCG
GGCCACGACACAAAGGCCATGGACCTGTGCTGGATGAGCACGATGCTTATAAAAATCAGTTGAGCCATAGCGTATCGCCT
TTTTTAGAACAACCTTTTCGATTTCAAGGGCAGCAATTCGATGCAGAAACGGGGCTCCACTACAACCGATTCAGGTATTA
TGATCCGAGTATAGGCAGATTTTTCAGCCAAGATCCAGTAGGCTTACACGGGGGAATTCATGGCTTCGCATACGCGCCTA
ATCCCAATAATTGGATAGATCCGCTTGGCTTAAGCAATAAATGCTATAACTGCCTACCCAAGTGCACAGATATTAACGCT
CCTCACAAGCCTAAAACTGCAGAAGAAATGGCTGCAGAACTTTCCAACCAAATTAACAAAAATTCTGTTACCTTTAGCAC
TCCAACGAAGCAGGGACACATAGACCTGCAGGGTAGGACTCACTATGACAAAGCAACAGAGACCCACATCCCAACACCAC
ACATTCAAACACGAGATATTAATATTGGACCCAATGAAAGAATAACTACTTCAAAAAAACCGAAGTTACCACTGCAGCAA
CAAAGCAAGATGTCAGAACGGCTCGCCGGCTTGCCAAAGAGAAAGGTTTATGCAGATGAATGCACCAGAAGCTCTAAAAA
AACTTACAAAATGGAACAACGAAAAATACAATGA

Upstream 100 bases:

>100_bases
GTATCGTGCCAACTGGCTTCTCGCTCTTCGCCCCCGGGGTGAAACACACGGCAGCGGGCCGGCGCCTGAAGGCACCTGCA
AGGCTGTGCATTTGTGGACG

Downstream 100 bases:

>100_bases
GAACTGTGAACATGAATTCACAATAGAAATAAAAAATATAGACAATCCCGGATGGTCAATAAATATAAACGGGGAAGCCG
GAAAAAACCCATTTACCATT

Product: Rhs family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRCAHRPACRGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLFIYEPGSFVPLATVQGTQQPG
DSRIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALRKVLKSATGTDALPGPRHKGHGPVLDEHDAYKNQLSHSVSP
FLEQPFRFQGQQFDAETGLHYNRFRYYDPSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINA
PHKPKTAEEMAAELSNQINKNSVTFSTPTKQGHIDLQGRTHYDKATETHIPTPHIQTRDINIGPNERITTSKKPKLPLQQ
QSKMSERLAGLPKRKVYADECTRSSKKTYKMEQRKIQ

Sequences:

>Translated_357_residues
MRCAHRPACRGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLFIYEPGSFVPLATVQGTQQPG
DSRIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALRKVLKSATGTDALPGPRHKGHGPVLDEHDAYKNQLSHSVSP
FLEQPFRFQGQQFDAETGLHYNRFRYYDPSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINA
PHKPKTAEEMAAELSNQINKNSVTFSTPTKQGHIDLQGRTHYDKATETHIPTPHIQTRDINIGPNERITTSKKPKLPLQQ
QSKMSERLAGLPKRKVYADECTRSSKKTYKMEQRKIQ
>Mature_357_residues
MRCAHRPACRGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLFIYEPGSFVPLATVQGTQQPG
DSRIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALRKVLKSATGTDALPGPRHKGHGPVLDEHDAYKNQLSHSVSP
FLEQPFRFQGQQFDAETGLHYNRFRYYDPSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINA
PHKPKTAEEMAAELSNQINKNSVTFSTPTKQGHIDLQGRTHYDKATETHIPTPHIQTRDINIGPNERITTSKKPKLPLQQ
QSKMSERLAGLPKRKVYADECTRSSKKTYKMEQRKIQ

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI48994942, Length=191, Percent_Identity=34.5549738219895, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786917, Length=151, Percent_Identity=37.0860927152318, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786706, Length=138, Percent_Identity=37.6811594202899, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1790020, Length=142, Percent_Identity=35.9154929577465, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 40221; Mature: 40221

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCAHRPACRGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLF
CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEE
IYEPGSFVPLATVQGTQQPGDSRIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALR
EECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECHHHHHHHHHH
KVLKSATGTDALPGPRHKGHGPVLDEHDAYKNQLSHSVSPFLEQPFRFQGQQFDAETGLH
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCEECHHCCCE
YNRFRYYDPSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINA
ECEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCC
PHKPKTAEEMAAELSNQINKNSVTFSTPTKQGHIDLQGRTHYDKATETHIPTPHIQTRDI
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC
NIGPNERITTSKKPKLPLQQQSKMSERLAGLPKRKVYADECTRSSKKTYKMEQRKIQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRCAHRPACRGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLF
CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEE
IYEPGSFVPLATVQGTQQPGDSRIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALR
EECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECHHHHHHHHHH
KVLKSATGTDALPGPRHKGHGPVLDEHDAYKNQLSHSVSPFLEQPFRFQGQQFDAETGLH
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCEECHHCCCE
YNRFRYYDPSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINA
ECEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCC
PHKPKTAEEMAAELSNQINKNSVTFSTPTKQGHIDLQGRTHYDKATETHIPTPHIQTRDI
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC
NIGPNERITTSKKPKLPLQQQSKMSERLAGLPKRKVYADECTRSSKKTYKMEQRKIQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503; 2644231; 2403547; 7934896 [H]