Click here to switch to the map view.

The map label for this gene is 120612431

Identifier: 120612431

GI number: 120612431

Start: 4214244

End: 4214654

Strand: Direct

Name: 120612431

Synonym: Aave_3789

Alternate gene names: NA

Gene position: 4214244-4214654 (Clockwise)

Preceding gene: 120612430

Following gene: 120612432

Centisome position: 78.73

GC content: 64.96

Gene sequence:

>411_bases
ATGGCAAGAAGACCCGTCAGCAAAGAACTGTGGCGACAGCTGCAACCCCTCATTCCGGCCTTCGTGCCATCGGCCAAGGG
TGGAGCGCGCAAGCGTACCGTGAGCGATGAGGCGGCCCTCAATGGCATCCTGTTCGTGCTGCACACGGGCATCGCCTGGG
AAGATCTGCCGCAATCCCTGGGCTATGGCAGCGGCATGACGTGCTGGCGACGGCTGCGAGACTGGAACGCTGCCGGGGTA
TGGCAGAAGCTGCACCACGCCATGCTGGTACGCCTGCGCGAACACGACCAGATCGATTGGAGCCGGGCGAGCATCGATGG
CTCGTCGGTGCCAAGCCCCCGGGGGGCCAGGAAACGGGCCCCAACCCTACGGACAGGGGCAAACTCGGCTCCAAGCGGCA
CATCGTCGTAG

Upstream 100 bases:

>100_bases
TGTCTGAAAGAATGGTCAGCAAATAACACACCCCCTTGATTTAAGAGCGGCTAACACCACCGACTGAGACCTGCGCAGAG
CCGTTATGCTTGGCGCCCTC

Downstream 100 bases:

>100_bases
ACGCGCGGGGCATTCCGCTGGTGGTGCTGGTCAGCGGTGCGAACCGGCACGATTCGATGATGTTCGAGAAATGCATCGAC
GCTCTGCCGGCCGTCAGAGG

Product: putative TIS1421-transposase orfA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MARRPVSKELWRQLQPLIPAFVPSAKGGARKRTVSDEAALNGILFVLHTGIAWEDLPQSLGYGSGMTCWRRLRDWNAAGV
WQKLHHAMLVRLREHDQIDWSRASIDGSSVPSPRGARKRAPTLRTGANSAPSGTSS

Sequences:

>Translated_136_residues
MARRPVSKELWRQLQPLIPAFVPSAKGGARKRTVSDEAALNGILFVLHTGIAWEDLPQSLGYGSGMTCWRRLRDWNAAGV
WQKLHHAMLVRLREHDQIDWSRASIDGSSVPSPRGARKRAPTLRTGANSAPSGTSS
>Mature_135_residues
ARRPVSKELWRQLQPLIPAFVPSAKGGARKRTVSDEAALNGILFVLHTGIAWEDLPQSLGYGSGMTCWRRLRDWNAAGVW
QKLHHAMLVRLREHDQIDWSRASIDGSSVPSPRGARKRAPTLRTGANSAPSGTSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14993; Mature: 14862

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPVSKELWRQLQPLIPAFVPSAKGGARKRTVSDEAALNGILFVLHTGIAWEDLPQSL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHC
GYGSGMTCWRRLRDWNAAGVWQKLHHAMLVRLREHDQIDWSRASIDGSSVPSPRGARKRA
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCC
PTLRTGANSAPSGTSS
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRPVSKELWRQLQPLIPAFVPSAKGGARKRTVSDEAALNGILFVLHTGIAWEDLPQSL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHC
GYGSGMTCWRRLRDWNAAGVWQKLHHAMLVRLREHDQIDWSRASIDGSSVPSPRGARKRA
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCC
PTLRTGANSAPSGTSS
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]