| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612426
Identifier: 120612426
GI number: 120612426
Start: 4205152
End: 4205637
Strand: Direct
Name: 120612426
Synonym: Aave_3784
Alternate gene names: NA
Gene position: 4205152-4205637 (Clockwise)
Preceding gene: 120612425
Following gene: 120612427
Centisome position: 78.56
GC content: 67.49
Gene sequence:
>486_bases ATGGCCATTCCACAACGAAACACCCCCGCCGCATCGCCCGTTCAAGGGTCCGTACGGGTCGGGAAAATCCTCCGCATCGA CTCGGGCGGCGCAGCGATCGTCGAGATTGACGATCAGCCGATCCCCGCGGAGATCGCGGCGCACCTGCCTTGGCCCGTCC CCGGGCAGCGGGTGGCCGTCATGCAGGATGCCGAAGAGCCGGCCCTGGTCCTGGCCGCCTACCCCCTGCGTGAAGCCGCC GCCATGTCCAACGGTCAGGACAGCGGCGTCCAGTCGGCGGGCGTGGGCTTCGACCCCACGACCGGCACTCTCCGCATCCA TGCCCAGCGCCTGGACCTGACGGCGCTCGGATCCGTCGAAATCCGTTGCGGCGATTCCGTGCTCCGTTTCAACGCGCAGG GAAGCGTCGTACTGGAAGCCCAGGCCATCACGCAGTCCTCCATCGGCCCCTACCGGATCGAAGGCGCATCCATCGACCTG AACTGA
Upstream 100 bases:
>100_bases ACAAGATCCTCTCCGTCAGCCCGCAGGTCCGGGACAACGACTGACACCCGGCTTCGGTTCGGCGGCCGTTCCCGCCGCTT CGCTTCAGATTGCATCCATC
Downstream 100 bases:
>100_bases ACGCCCTCATGCCCAGCCGTGACCAGCTCATCGCAGAGCTCCTGGAGGAAACAGTACGCGCCCGCCGCCGCCGGCTCCAC ATCACCGGAACGATGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAA AMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDL N
Sequences:
>Translated_161_residues MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAA AMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDL N >Mature_160_residues AIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAAA MSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16745; Mature: 16614
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAV CCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHEECCCCCCCCEEEE MQDAEEPALVLAAYPLREAAAMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVE EECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECEEECCEEE IRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN EEECCEEEEECCCCCEEEEEEECCCCCCCCEEEECEEEECC >Mature Secondary Structure AIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAV CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHEECCCCCCCCEEEE MQDAEEPALVLAAYPLREAAAMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVE EECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECEEECCEEE IRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN EEECCEEEEECCCCCEEEEEEECCCCCCCCEEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA