Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612426

Identifier: 120612426

GI number: 120612426

Start: 4205152

End: 4205637

Strand: Direct

Name: 120612426

Synonym: Aave_3784

Alternate gene names: NA

Gene position: 4205152-4205637 (Clockwise)

Preceding gene: 120612425

Following gene: 120612427

Centisome position: 78.56

GC content: 67.49

Gene sequence:

>486_bases
ATGGCCATTCCACAACGAAACACCCCCGCCGCATCGCCCGTTCAAGGGTCCGTACGGGTCGGGAAAATCCTCCGCATCGA
CTCGGGCGGCGCAGCGATCGTCGAGATTGACGATCAGCCGATCCCCGCGGAGATCGCGGCGCACCTGCCTTGGCCCGTCC
CCGGGCAGCGGGTGGCCGTCATGCAGGATGCCGAAGAGCCGGCCCTGGTCCTGGCCGCCTACCCCCTGCGTGAAGCCGCC
GCCATGTCCAACGGTCAGGACAGCGGCGTCCAGTCGGCGGGCGTGGGCTTCGACCCCACGACCGGCACTCTCCGCATCCA
TGCCCAGCGCCTGGACCTGACGGCGCTCGGATCCGTCGAAATCCGTTGCGGCGATTCCGTGCTCCGTTTCAACGCGCAGG
GAAGCGTCGTACTGGAAGCCCAGGCCATCACGCAGTCCTCCATCGGCCCCTACCGGATCGAAGGCGCATCCATCGACCTG
AACTGA

Upstream 100 bases:

>100_bases
ACAAGATCCTCTCCGTCAGCCCGCAGGTCCGGGACAACGACTGACACCCGGCTTCGGTTCGGCGGCCGTTCCCGCCGCTT
CGCTTCAGATTGCATCCATC

Downstream 100 bases:

>100_bases
ACGCCCTCATGCCCAGCCGTGACCAGCTCATCGCAGAGCTCCTGGAGGAAACAGTACGCGCCCGCCGCCGCCGGCTCCAC
ATCACCGGAACGATGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAA
AMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDL
N

Sequences:

>Translated_161_residues
MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAA
AMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDL
N
>Mature_160_residues
AIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAVMQDAEEPALVLAAYPLREAAA
MSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVEIRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16745; Mature: 16614

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAV
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHEECCCCCCCCEEEE
MQDAEEPALVLAAYPLREAAAMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVE
EECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECEEECCEEE
IRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN
EEECCEEEEECCCCCEEEEEEECCCCCCCCEEEECEEEECC
>Mature Secondary Structure 
AIPQRNTPAASPVQGSVRVGKILRIDSGGAAIVEIDDQPIPAEIAAHLPWPVPGQRVAV
CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHEECCCCCCCCEEEE
MQDAEEPALVLAAYPLREAAAMSNGQDSGVQSAGVGFDPTTGTLRIHAQRLDLTALGSVE
EECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECEEECCEEE
IRCGDSVLRFNAQGSVVLEAQAITQSSIGPYRIEGASIDLN
EEECCEEEEECCCCCEEEEEEECCCCCCCCEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA