| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612403
Identifier: 120612403
GI number: 120612403
Start: 4178227
End: 4179510
Strand: Direct
Name: 120612403
Synonym: Aave_3760
Alternate gene names: NA
Gene position: 4178227-4179510 (Clockwise)
Preceding gene: 120612396
Following gene: 120612404
Centisome position: 78.06
GC content: 68.77
Gene sequence:
>1284_bases GTGCGCAGAATCTCCTTTGTCGCCCTGGCGCTCATGCTGGGCTCGGGCATGCCCCTGCAGGCCCAGGAGGCCACGGAAAA CAGTGTCTCCCTCAGCGGCTTCGGCACCGCGGGTGTAGTCAACAAGACCGGAGCCCCGCATTGGGGACTGATCCGCAGCA CCGCGCAGAAAGGCGCCGAGGCAGAACTCAGCGCCACGACGGATTCCAGGTTGGGCGCGCAAATCGACTGGAACCACAGC AGCGGTTGGGAAGCCGCCGCCCAGGGCGTCCTGTTGCACAGGGCCAGGGGTGCGTTCTCCGGCGAAGCGATCGAGCAGGC CTACGTCGGCTACCGGCCGTGGGCGAATACCCGCCTCCGAATGGGCCGGGTCAGCCCGGACATGTTCCTGTACTCCGAGA GCCGCAACGTCGGCTATGCATTCACCTGGGCGCGCCCGCCCACCGATTTCTATGCCTTCGCGCCGGTCGTGGCCGTCGAT GGCCTGGACGTGGAGCAGCGCTGGGATACGGGCAGTTCGTCGTGGCGCCTGCGCGCCACCACCGGCACGATGAGAACCAG CACCACCGACGGTGGCCGGTCCCACCGGCCGGCGAAAGCGCACGACATCCTGGCGATCGGGCTGTCGCGGGAAGCGGGCG GGCTGCTGCTGAAACTCAGCTACCTGCATTCCCGGGTGAACCTGGACCCGGGCCCGGACTATGCGGCGCTGCGCCAGGGC GTGGACAGCCTCCAGCAGTCTCCCCTACCCGGAGTGCGGGAGGCTGTCACGCCGCTGCGCGACAGGCTCTGGACCGGCGG CGCGACCAGCTACCTGGCGCTCGCCACCCAGTACGACAGCGGCCCCTGGACCTTCGTGGCGGAAGGCAGCCGGCTGAGCA TTCCCAGGAGCACGCTGGATGCCTACCGGGCCTATGCCAGCGCCGCTTGGCGCAAGGACACGGTCACCTATTACGCCCTC GCCAGCCGGGTGAAGCCGCGGGAGGCGGCCTTGGCGACTCCCGACGTGGCCTCCTCGCTGGCGCCCGTGGCGGGACCCGC CGCGGCCCGGCAGGCCCAGATGCTGGCAGGTTACGCCACCTACGCGGCCAACCAGCTCCGCTTCGATCAGAGCACGTTCG GCGTGGGTCTCCGGTGGGATTTCGCATCGAATGCCGCGCTCAAGTTCCAGGTCGATCGATTCCACGTCCGGCAGAACGGC GGAGCAGGCTGGCGCAACCACGACGGGCATGCCGCCAAGGGCAACCTGGTGTCCCTGCTGGTCGATTTCGTATGGGGCCA GTGA
Upstream 100 bases:
>100_bases CTCGGGATTTCCTGGCTCGCAGACCATCTTGATCACCAGAACAACCACTTTCCCTCCGGCGGGGCGGTCGAAGACAGCTT CGCATCCCGGAGCCCGTTCT
Downstream 100 bases:
>100_bases TGCCACGCGCGCTCCCGAAACTCCCGCGCATGCTGACCGCCATCGCGCTGGCGGTCCATGCGCTGCATTTCACCGTGGCT TCTGCCCCCATCTACGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MRRISFVALALMLGSGMPLQAQEATENSVSLSGFGTAGVVNKTGAPHWGLIRSTAQKGAEAELSATTDSRLGAQIDWNHS SGWEAAAQGVLLHRARGAFSGEAIEQAYVGYRPWANTRLRMGRVSPDMFLYSESRNVGYAFTWARPPTDFYAFAPVVAVD GLDVEQRWDTGSSSWRLRATTGTMRTSTTDGGRSHRPAKAHDILAIGLSREAGGLLLKLSYLHSRVNLDPGPDYAALRQG VDSLQQSPLPGVREAVTPLRDRLWTGGATSYLALATQYDSGPWTFVAEGSRLSIPRSTLDAYRAYASAAWRKDTVTYYAL ASRVKPREAALATPDVASSLAPVAGPAAARQAQMLAGYATYAANQLRFDQSTFGVGLRWDFASNAALKFQVDRFHVRQNG GAGWRNHDGHAAKGNLVSLLVDFVWGQ
Sequences:
>Translated_427_residues MRRISFVALALMLGSGMPLQAQEATENSVSLSGFGTAGVVNKTGAPHWGLIRSTAQKGAEAELSATTDSRLGAQIDWNHS SGWEAAAQGVLLHRARGAFSGEAIEQAYVGYRPWANTRLRMGRVSPDMFLYSESRNVGYAFTWARPPTDFYAFAPVVAVD GLDVEQRWDTGSSSWRLRATTGTMRTSTTDGGRSHRPAKAHDILAIGLSREAGGLLLKLSYLHSRVNLDPGPDYAALRQG VDSLQQSPLPGVREAVTPLRDRLWTGGATSYLALATQYDSGPWTFVAEGSRLSIPRSTLDAYRAYASAAWRKDTVTYYAL ASRVKPREAALATPDVASSLAPVAGPAAARQAQMLAGYATYAANQLRFDQSTFGVGLRWDFASNAALKFQVDRFHVRQNG GAGWRNHDGHAAKGNLVSLLVDFVWGQ >Mature_427_residues MRRISFVALALMLGSGMPLQAQEATENSVSLSGFGTAGVVNKTGAPHWGLIRSTAQKGAEAELSATTDSRLGAQIDWNHS SGWEAAAQGVLLHRARGAFSGEAIEQAYVGYRPWANTRLRMGRVSPDMFLYSESRNVGYAFTWARPPTDFYAFAPVVAVD GLDVEQRWDTGSSSWRLRATTGTMRTSTTDGGRSHRPAKAHDILAIGLSREAGGLLLKLSYLHSRVNLDPGPDYAALRQG VDSLQQSPLPGVREAVTPLRDRLWTGGATSYLALATQYDSGPWTFVAEGSRLSIPRSTLDAYRAYASAAWRKDTVTYYAL ASRVKPREAALATPDVASSLAPVAGPAAARQAQMLAGYATYAANQLRFDQSTFGVGLRWDFASNAALKFQVDRFHVRQNG GAGWRNHDGHAAKGNLVSLLVDFVWGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46155; Mature: 46155
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRISFVALALMLGSGMPLQAQEATENSVSLSGFGTAGVVNKTGAPHWGLIRSTAQKGAE CCHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC AELSATTDSRLGAQIDWNHSSGWEAAAQGVLLHRARGAFSGEAIEQAYVGYRPWANTRLR CEEECCCCCCCCCEEECCCCCCHHHHHCCHHEEHHCCCCCCHHHHHHHCCCCCCCCCEEE MGRVSPDMFLYSESRNVGYAFTWARPPTDFYAFAPVVAVDGLDVEQRWDTGSSSWRLRAT ECCCCCCEEEEECCCCCCEEEEECCCCCCHHHHCCEEEECCCCHHHHCCCCCCCEEEEEE TGTMRTSTTDGGRSHRPAKAHDILAIGLSREAGGLLLKLSYLHSRVNLDPGPDYAALRQG CCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHH VDSLQQSPLPGVREAVTPLRDRLWTGGATSYLALATQYDSGPWTFVAEGSRLSIPRSTLD HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCEECCCHHHHH AYRAYASAAWRKDTVTYYALASRVKPREAALATPDVASSLAPVAGPAAARQAQMLAGYAT HHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH YAANQLRFDQSTFGVGLRWDFASNAALKFQVDRFHVRQNGGAGWRNHDGHAAKGNLVSLL HHHHHEEECCHHCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHH VDFVWGQ HHHHCCC >Mature Secondary Structure MRRISFVALALMLGSGMPLQAQEATENSVSLSGFGTAGVVNKTGAPHWGLIRSTAQKGAE CCHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC AELSATTDSRLGAQIDWNHSSGWEAAAQGVLLHRARGAFSGEAIEQAYVGYRPWANTRLR CEEECCCCCCCCCEEECCCCCCHHHHHCCHHEEHHCCCCCCHHHHHHHCCCCCCCCCEEE MGRVSPDMFLYSESRNVGYAFTWARPPTDFYAFAPVVAVDGLDVEQRWDTGSSSWRLRAT ECCCCCCEEEEECCCCCCEEEEECCCCCCHHHHCCEEEECCCCHHHHCCCCCCCEEEEEE TGTMRTSTTDGGRSHRPAKAHDILAIGLSREAGGLLLKLSYLHSRVNLDPGPDYAALRQG CCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHH VDSLQQSPLPGVREAVTPLRDRLWTGGATSYLALATQYDSGPWTFVAEGSRLSIPRSTLD HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCEECCCHHHHH AYRAYASAAWRKDTVTYYALASRVKPREAALATPDVASSLAPVAGPAAARQAQMLAGYAT HHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH YAANQLRFDQSTFGVGLRWDFASNAALKFQVDRFHVRQNGGAGWRNHDGHAAKGNLVSLL HHHHHEEECCHHCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHH VDFVWGQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA