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The map label for this gene is petC [H]

Identifier: 120612338

GI number: 120612338

Start: 4071231

End: 4071986

Strand: Reverse

Name: petC [H]

Synonym: Aave_3694

Alternate gene names: 120612338

Gene position: 4071986-4071231 (Counterclockwise)

Preceding gene: 120612339

Following gene: 120612337

Centisome position: 76.07

GC content: 64.42

Gene sequence:

>756_bases
ATGAAAAAAATCATCCTCACGCTGATCGCCTCGCTCGGCTTCGTCCTGGGCGCGCACGCCGCGGAAGGCGGCATCGCCTG
GGACAAGGCCCCGGTGCGCACGAACGACACGGCCTCGCTGCAGAACGGCGCCAAGATCTTCGTCAACTACTGCCTGAGCT
GCCACTCGGCCGCCTTCATGCGCTACAACCGCCTGAAGGACATCGGCCTGACCGACCAGCAGATCAAGGACAACCTGCTC
TTCACCACCGACAAGGTGGGCGAGACCATGAAGGCCACCATCGATCCGCGGCAGGCCAAGGACTGGTTCGGCGCCAATCC
GCCGGACCTCACCGTGATCGCCCGCTCCCGCGCCGGCCACAACGGCACCGGGGCGGACTACCTCTACACCTTCCTGCGCA
CGTTCTACCGCGACGACACCAAGGCCACGGGCTGGAACAACCTCGCCTTCCCCAGCGTCGGCATGCCCCACGCACTGTGG
CAACTGCAGGGCGAACGCCGCCCTGTCTTCGAGGAACACGAGAGCCACGGACACAAAACCCAGGTCTTCAAGGGGTGGGA
GCAGCTGACTCCGGGTACCATGTCGCCCCTCCAGTACGACGAGGCCGTGGGTGATCTCGTCAACTACCTGCAGTGGATGG
GCGAGCCGGCGCAAAATACACGGGTTCGCGTCGGGGTGTGGGTGCTGATCTTCCTCGGCGTCTTCACGGTGATCGCCTGG
CGGCTCAACGCGGCGTTCTGGAAGGACGTCAAGTAA

Upstream 100 bases:

>100_bases
TCTTCCTGCTCATGCCGTGGTGGAGCCGACTGGGCGAGCCCAAGCCGGTGCCCGACCGCGTGACCTTCGCCGCGCACTGA
AGCGGGCCGGAACGACGACC

Downstream 100 bases:

>100_bases
GCTCGGCCGCCGCCTGCAGCATCGCGCCGCCTCGTGCGGCGCATTTCGCTTTCCGGAGTGGACGCGCGAGCGCCCACTCT
TTTTGATTTTTAGGAGCTTC

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKKIILTLIASLGFVLGAHAAEGGIAWDKAPVRTNDTASLQNGAKIFVNYCLSCHSAAFMRYNRLKDIGLTDQQIKDNLL
FTTDKVGETMKATIDPRQAKDWFGANPPDLTVIARSRAGHNGTGADYLYTFLRTFYRDDTKATGWNNLAFPSVGMPHALW
QLQGERRPVFEEHESHGHKTQVFKGWEQLTPGTMSPLQYDEAVGDLVNYLQWMGEPAQNTRVRVGVWVLIFLGVFTVIAW
RLNAAFWKDVK

Sequences:

>Translated_251_residues
MKKIILTLIASLGFVLGAHAAEGGIAWDKAPVRTNDTASLQNGAKIFVNYCLSCHSAAFMRYNRLKDIGLTDQQIKDNLL
FTTDKVGETMKATIDPRQAKDWFGANPPDLTVIARSRAGHNGTGADYLYTFLRTFYRDDTKATGWNNLAFPSVGMPHALW
QLQGERRPVFEEHESHGHKTQVFKGWEQLTPGTMSPLQYDEAVGDLVNYLQWMGEPAQNTRVRVGVWVLIFLGVFTVIAW
RLNAAFWKDVK
>Mature_251_residues
MKKIILTLIASLGFVLGAHAAEGGIAWDKAPVRTNDTASLQNGAKIFVNYCLSCHSAAFMRYNRLKDIGLTDQQIKDNLL
FTTDKVGETMKATIDPRQAKDWFGANPPDLTVIARSRAGHNGTGADYLYTFLRTFYRDDTKATGWNNLAFPSVGMPHALW
QLQGERRPVFEEHESHGHKTQVFKGWEQLTPGTMSPLQYDEAVGDLVNYLQWMGEPAQNTRVRVGVWVLIFLGVFTVIAW
RLNAAFWKDVK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28221; Mature: 28221

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILTLIASLGFVLGAHAAEGGIAWDKAPVRTNDTASLQNGAKIFVNYCLSCHSAAFM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
RYNRLKDIGLTDQQIKDNLLFTTDKVGETMKATIDPRQAKDWFGANPPDLTVIARSRAGH
HHHHHHCCCCCHHHHHCCCEEECHHHCCHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCC
NGTGADYLYTFLRTFYRDDTKATGWNNLAFPSVGMPHALWQLQGERRPVFEEHESHGHKT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCHH
QVFKGWEQLTPGTMSPLQYDEAVGDLVNYLQWMGEPAQNTRVRVGVWVLIFLGVFTVIAW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
RLNAAFWKDVK
HHHHHHHCCCC
>Mature Secondary Structure
MKKIILTLIASLGFVLGAHAAEGGIAWDKAPVRTNDTASLQNGAKIFVNYCLSCHSAAFM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
RYNRLKDIGLTDQQIKDNLLFTTDKVGETMKATIDPRQAKDWFGANPPDLTVIARSRAGH
HHHHHHCCCCCHHHHHCCCEEECHHHCCHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCC
NGTGADYLYTFLRTFYRDDTKATGWNNLAFPSVGMPHALWQLQGERRPVFEEHESHGHKT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCHH
QVFKGWEQLTPGTMSPLQYDEAVGDLVNYLQWMGEPAQNTRVRVGVWVLIFLGVFTVIAW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
RLNAAFWKDVK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA