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The map label for this gene is ugpQ [H]

Identifier: 120612300

GI number: 120612300

Start: 4031122

End: 4031883

Strand: Direct

Name: ugpQ [H]

Synonym: Aave_3655

Alternate gene names: 120612300

Gene position: 4031122-4031883 (Clockwise)

Preceding gene: 120612299

Following gene: 120612301

Centisome position: 75.31

GC content: 73.49

Gene sequence:

>762_bases
ATGACTGCCACCCCATCCACCACGCCCCCCGCCTGGCCCTACCCCCAATGGATTGCCCACCGCGGCGCGGGCCGGCTGGC
CCCCGAGAACACCCTGGCGGCCTTCCGGCTCGGCGCGCGCCACGGCTACCGCATGTTCGAATGCGATGCCAAGCTCAGCA
GCGACGGCGTCGTCTTCCTGCTGCACGACGCCACCCTGGACCGCACCACCAACGGCCAGGGCACCGCCGGCGAGCGCCCC
TGGGGCGAACTCGCGCAGCTCGACGCGGGCAGCTGGCATTCCCGCGGCAGCGCGGGCGAGCCCCTGCCGACCCTGGAGCA
CCTGGCGCGCTACTGCCTGGCCAACGGCTACCTGCTGAACATCGAGATCAAGCCCACGCCGGGCACCGAGGAAGAAACCG
GCCGCGCCGTCGCGGCGCTGGCGGCCCGGCTCTGGCACCAGGCCGACATCCCTCCGCTGCTCACCTCCTTCAAGGTGGCG
GCGCTCACGGGCGCGCGCGACGCCGCGCCCCTGCTGCCGCGCGGGCTGCTGCTCGACACCCTGGAGCCCGGCTGGCTGGA
CACCGCCCGCCAGCTCGGCTGCGCGGCGGTGGTCTGCAACCACGCGCTCTGGACGGCGGAGCACGTCGCCGCCGTGAAGG
CCTGCGGCCTGCGCACGCTCAGCTACACGGTGAACGACGAATGGGCCGCGCAGCGGCTCATCGACCTGGGCACCGACGGG
ATCATCACCGACCGGGTGGACCTCTTCAGTCCGGCGCGGTGA

Upstream 100 bases:

>100_bases
CTACGTGCACGATCCCCACGGCAACCTGCTCAAGTTCGGCGAAGAGGTCCGTTCTTCCTGAGCGTCACGGTCGCTGCCGT
CGGTCCTATAGTTCATCGCC

Downstream 100 bases:

>100_bases
TACCCTCGCGGGTCCAGCCATGGACGCGACCATTCACTCCCTTTCCCTGCTTCGTTTCCTGCGGCGCCTTCCGCGCACGG
CGCTGGCGATGATCCTCCTG

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTATPSTTPPAWPYPQWIAHRGAGRLAPENTLAAFRLGARHGYRMFECDAKLSSDGVVFLLHDATLDRTTNGQGTAGERP
WGELAQLDAGSWHSRGSAGEPLPTLEHLARYCLANGYLLNIEIKPTPGTEEETGRAVAALAARLWHQADIPPLLTSFKVA
ALTGARDAAPLLPRGLLLDTLEPGWLDTARQLGCAAVVCNHALWTAEHVAAVKACGLRTLSYTVNDEWAAQRLIDLGTDG
IITDRVDLFSPAR

Sequences:

>Translated_253_residues
MTATPSTTPPAWPYPQWIAHRGAGRLAPENTLAAFRLGARHGYRMFECDAKLSSDGVVFLLHDATLDRTTNGQGTAGERP
WGELAQLDAGSWHSRGSAGEPLPTLEHLARYCLANGYLLNIEIKPTPGTEEETGRAVAALAARLWHQADIPPLLTSFKVA
ALTGARDAAPLLPRGLLLDTLEPGWLDTARQLGCAAVVCNHALWTAEHVAAVKACGLRTLSYTVNDEWAAQRLIDLGTDG
IITDRVDLFSPAR
>Mature_252_residues
TATPSTTPPAWPYPQWIAHRGAGRLAPENTLAAFRLGARHGYRMFECDAKLSSDGVVFLLHDATLDRTTNGQGTAGERPW
GELAQLDAGSWHSRGSAGEPLPTLEHLARYCLANGYLLNIEIKPTPGTEEETGRAVAALAARLWHQADIPPLLTSFKVAA
LTGARDAAPLLPRGLLLDTLEPGWLDTARQLGCAAVVCNHALWTAEHVAAVKACGLRTLSYTVNDEWAAQRLIDLGTDGI
ITDRVDLFSPAR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI284055245, Length=88, Percent_Identity=47.7272727272727, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI284055240, Length=88, Percent_Identity=47.7272727272727, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI284055242, Length=88, Percent_Identity=47.7272727272727, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI21361649, Length=88, Percent_Identity=47.7272727272727, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI7706617, Length=109, Percent_Identity=36.697247706422, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI189571657, Length=88, Percent_Identity=44.3181818181818, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1789858, Length=240, Percent_Identity=50.8333333333333, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27248; Mature: 27117

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPSTTPPAWPYPQWIAHRGAGRLAPENTLAAFRLGARHGYRMFECDAKLSSDGVVFL
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEE
LHDATLDRTTNGQGTAGERPWGELAQLDAGSWHSRGSAGEPLPTLEHLARYCLANGYLLN
EECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
IEIKPTPGTEEETGRAVAALAARLWHQADIPPLLTSFKVAALTGARDAAPLLPRGLLLDT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
LEPGWLDTARQLGCAAVVCNHALWTAEHVAAVKACGLRTLSYTVNDEWAAQRLIDLGTDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCC
IITDRVDLFSPAR
EEECCHHHCCCCC
>Mature Secondary Structure 
TATPSTTPPAWPYPQWIAHRGAGRLAPENTLAAFRLGARHGYRMFECDAKLSSDGVVFL
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEE
LHDATLDRTTNGQGTAGERPWGELAQLDAGSWHSRGSAGEPLPTLEHLARYCLANGYLLN
EECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
IEIKPTPGTEEETGRAVAALAARLWHQADIPPLLTSFKVAALTGARDAAPLLPRGLLLDT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
LEPGWLDTARQLGCAAVVCNHALWTAEHVAAVKACGLRTLSYTVNDEWAAQRLIDLGTDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCC
IITDRVDLFSPAR
EEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]